RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NDUFC1O43677 76 aa11.48□□□□□ -0.57
GNE-202ENST00000396594 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
GNE-202ENST00000396594 J3KT08 172 aa11.48□□□□□ -0.57
GNE-202ENST00000396594 UBE2D1P51668 147 aa11.48□□□□□ -0.57
GNE-202ENST00000396594 DAND5Q8N907 189 aa11.48□□□□□ -0.57
GNE-202ENST00000396594 CLEC2BQ92478 149 aa11.47□□□□□ -0.57
GNE-202ENST00000396594 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
GNE-202ENST00000396594 NCOA6Q14686 2063 aaPredicted RBP11.47□□□□□ -0.57
GNE-202ENST00000396594 SPTBN2O15020 2390 aa11.47□□□□□ -0.57
GNE-202ENST00000396594 TCL1BO95988 128 aa11.46□□□□□ -0.57
GNE-202ENST00000396594 NHLRC4P0CG21 123 aaPredicted RBP11.46□□□□□ -0.57
GNE-202ENST00000396594 FAM236AA0A1B0GUQ0 79 aa11.46□□□□□ -0.58
GNE-202ENST00000396594 FAM236BA0A1B0GV22 79 aa11.46□□□□□ -0.58
GNE-202ENST00000396594 BBC3Q96PG8 261 aaPredicted RBP11.45□□□□□ -0.58
GNE-202ENST00000396594 WFDC2Q14508 124 aa11.45□□□□□ -0.58
GNE-202ENST00000396594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.45□□□□□ -0.58
GNE-202ENST00000396594 MED12LQ86YW9 2145 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 H0Y9J4 135 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 Q8N2B8 174 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
GNE-202ENST00000396594 CEMP1Q6PRD7 247 aaPredicted RBP11.44□□□□□ -0.58
GNE-202ENST00000396594 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
GNE-202ENST00000396594 MUC6Q6W4X9 2439 aa11.43□□□□□ -0.58
GNE-202ENST00000396594 A0A087WZ39 114 aa11.43□□□□□ -0.58
GNE-202ENST00000396594 CDC42SE2Q9NRR3 84 aa11.43□□□□□ -0.58
GNE-202ENST00000396594 DSCAMO60469 2012 aa11.42□□□□□ -0.58
GNE-202ENST00000396594 HIGD2AQ9BW72 106 aa11.42□□□□□ -0.58
GNE-202ENST00000396594 V9GYY9 64 aa11.42□□□□□ -0.58
GNE-202ENST00000396594 IGKV3D-7A0A0C4DH55 119 aa11.42□□□□□ -0.58
GNE-202ENST00000396594 TNRC6BQ9UPQ9 1833 aaKnown RBP11.42□□□□□ -0.58
GNE-202ENST00000396594 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
GNE-202ENST00000396594 IGKV2-24A0A0C4DH68 120 aa11.4□□□□□ -0.58
GNE-202ENST00000396594 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
GNE-202ENST00000396594 FRMD6-AS1P0C7T7 363 aa11.4□□□□□ -0.58
GNE-202ENST00000396594 UQCRQO14949 82 aa11.4□□□□□ -0.58
GNE-202ENST00000396594 SPTAN1Q13813 2472 aaKnown RBP11.39□□□□□ -0.59
GNE-202ENST00000396594 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
GNE-202ENST00000396594 A0A1B0GUV1 79 aa11.39□□□□□ -0.59
GNE-202ENST00000396594 IGHV4-30-4P0DP06 118 aa11.39□□□□□ -0.59
GNE-202ENST00000396594 ODF3L2Q3SX64 289 aa11.39□□□□□ -0.59
GNE-202ENST00000396594 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.594e-6■■■■□ 23.2
GNE-202ENST00000396594 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
GNE-202ENST00000396594 LST1O00453 97 aa11.39□□□□□ -0.59
GNE-202ENST00000396594 C14orf132Q9NPU4 83 aa11.38□□□□□ -0.59
GNE-202ENST00000396594 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
GNE-202ENST00000396594 MRPL55Q7Z7F7 128 aaKnown RBP11.37□□□□□ -0.59
GNE-202ENST00000396594 HIVEP2P31629 2446 aa11.37□□□□□ -0.59
GNE-202ENST00000396594 PRR9Q5T870 116 aa11.37□□□□□ -0.59
GNE-202ENST00000396594 RPL28P46779 137 aaKnown RBP11.36□□□□□ -0.59
GNE-202ENST00000396594 Q6JHZ5 121 aa11.36□□□□□ -0.59
GNE-202ENST00000396594 TRIAP1O43715 76 aa11.36□□□□□ -0.59
GNE-202ENST00000396594 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
GNE-202ENST00000396594 FAM240AA0A1B0GVK7 77 aa11.36□□□□□ -0.59
GNE-202ENST00000396594 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
GNE-202ENST00000396594 C10orf99Q6UWK7 81 aa11.35□□□□□ -0.59
GNE-202ENST00000396594 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
GNE-202ENST00000396594 PCNX1Q96RV3 2341 aa11.34□□□□□ -0.59
GNE-202ENST00000396594 PRR15LQ9BU68 103 aa11.34□□□□□ -0.59
GNE-202ENST00000396594 ZNF73O43830 326 aaPredicted RBP11.34□□□□□ -0.59
GNE-202ENST00000396594 ADAMTS20P59510 1910 aa11.33□□□□□ -0.6
GNE-202ENST00000396594 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
GNE-202ENST00000396594 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
GNE-202ENST00000396594 SPTSSBQ8NFR3 76 aa11.33□□□□□ -0.6
GNE-202ENST00000396594 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
GNE-202ENST00000396594 AMELXQ99217 191 aa11.32□□□□□ -0.6
GNE-202ENST00000396594 AVPP01185 164 aa11.31□□□□□ -0.6
GNE-202ENST00000396594 CPAMD8Q8IZJ3 1885 aa11.31□□□□□ -0.6
GNE-202ENST00000396594 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
GNE-202ENST00000396594 H3BNG1 76 aa11.3□□□□□ -0.6
GNE-202ENST00000396594 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
GNE-202ENST00000396594 B5MCH6 92 aa11.3□□□□□ -0.6
GNE-202ENST00000396594 PRYO14603 147 aa11.3□□□□□ -0.6
GNE-202ENST00000396594 M0QXV9 152 aa11.3□□□□□ -0.6
GNE-202ENST00000396594 CCKP06307 115 aa11.29□□□□□ -0.6
GNE-202ENST00000396594 A0A0J9YWU9 116 aa11.29□□□□□ -0.6
GNE-202ENST00000396594 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
GNE-202ENST00000396594 Q6Q795 121 aa11.29□□□□□ -0.6
GNE-202ENST00000396594 K7ERS5 55 aa11.29□□□□□ -0.6
GNE-202ENST00000396594 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
GNE-202ENST00000396594 FHL2Q14192 279 aa11.28□□□□□ -0.6
GNE-202ENST00000396594 CREBBPQ92793 2442 aa11.27□□□□□ -0.6
GNE-202ENST00000396594 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.61
GNE-202ENST00000396594 PROK1P58294 105 aa11.27□□□□□ -0.61
GNE-202ENST00000396594 FHL3Q13643 280 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 CDSNQ15517 529 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 COL4A2P08572 1712 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 NDUFV3P56181 108 aaKnown RBP11.26□□□□□ -0.61
GNE-202ENST00000396594 OTOGLQ3ZCN5 2332 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 Q6ZS46 218 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 C18orf65Q6ZTR6 163 aa11.26□□□□□ -0.61
GNE-202ENST00000396594 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 CYSRT1A8MQ03 144 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 Q6ZQY7 126 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms