RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CELSR1Q9NYQ6 3014 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 BUB1B-PAK6H3BSN5 160 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 NCR3O14931 201 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 CRYGAP11844 174 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 LYPD2Q6UXB3 125 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 TMEM167AQ8TBQ9 72 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 A0A087WZ39 114 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 PSPHP1O15172 72 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 LEPROTO15243 131 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 P0DMU3 169 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 RNF185Q96GF1 192 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 GNRH2O43555 120 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 LINC00574Q9H8X3 128 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 LINC00474Q9P2X8 69 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 FAM223BA6NKX1 122 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 LECT2O14960 151 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 TEX36Q5VZQ5 186 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 RUSC1-AS1Q66K80 236 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 TMEM200BQ69YZ2 307 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
NDE1-202ENST00000396355 IGHV3OR16-12A0A075B7B8 117 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 A0A0J9YXY3 114 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 LY6G6DO95868 133 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 DEFB1P60022 68 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 PVRIGQ6DKI7 326 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 Q9H8V8 135 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 FBN2P35556 2912 aa6.36□□□□□ -1.39
NDE1-202ENST00000396355 IGKV1D-37A0A075B6S9 117 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 UPK3BQ9BT76 320 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 KLK9Q9UKQ9 250 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 IGHV3-38A0A0C4DH36 116 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 ZNF580Q9UK33 172 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 F6UB75 175 aa6.35□□□□□ -1.39
NDE1-202ENST00000396355 LST1O00453 97 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 IGHV3-30-3P0DP02 117 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 ZNF833PQ6ZTB9 187 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 TMEM61Q8N0U2 210 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 RMI2Q96E14 147 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 ZMAT4Q9H898 229 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 XCL1P47992 114 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 NANOS2P60321 138 aaKnown RBP6.34□□□□□ -1.39
NDE1-202ENST00000396355 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 XCL2Q9UBD3 114 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 ZNF491Q8N8L2 437 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 NRACQ8N912 160 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 RITA1Q96K30 269 aa6.34□□□□□ -1.39
NDE1-202ENST00000396355 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 TMEM141Q96I45 108 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 TMEM89A2RUT3 159 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 U3KQK5 164 aa6.33□□□□□ -1.4
NDE1-202ENST00000396355 FSTL3O95633 263 aa6.32□□□□□ -1.4
NDE1-202ENST00000396355 FHL2Q14192 279 aa6.32□□□□□ -1.4
NDE1-202ENST00000396355 IGLV2-23P01705 113 aa6.32□□□□□ -1.4
NDE1-202ENST00000396355 LY6EQ16553 131 aa6.32□□□□□ -1.4
NDE1-202ENST00000396355 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
NDE1-202ENST00000396355 H3BRN7 92 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 TMEM178BH3BS89 294 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 TMEM14CQ9P0S9 112 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 TRBV7-6A0A0J9YX20 115 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 PAX8Q06710 450 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 C9orf139Q6ZV77 190 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 SMCR5Q8TEV8 140 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 DPM3Q9P2X0 92 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 LINC01619G3V211 115 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 PDE6HQ13956 83 aa6.31□□□□□ -1.4
NDE1-202ENST00000396355 COX7A2LO14548 114 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 PIK3CD-AS1Q5SR53 167 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
NDE1-202ENST00000396355 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
NDE1-202ENST00000396355 CXCL5P42830 114 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 ADAMTSL4-AS1Q5T5F5 129 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 MDFIQ99750 246 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 E7EQL1 145 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 UBE2L6O14933 153 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 ZNF672Q499Z4 452 aaPredicted RBP6.3□□□□□ -1.4
NDE1-202ENST00000396355 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
NDE1-202ENST00000396355 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms