RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
SIL1-202ENST00000394817 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
SIL1-202ENST00000394817 UBE2D3P61077 147 aa13.27□□□□□ -0.28
SIL1-202ENST00000394817 UBE2D2P62837 147 aa13.27□□□□□ -0.28
SIL1-202ENST00000394817 OVOL2Q9BRP0 275 aa13.27□□□□□ -0.28
SIL1-202ENST00000394817 NOTCH3Q9UM47 2321 aa13.27□□□□□ -0.29
SIL1-202ENST00000394817 CYSRT1A8MQ03 144 aa13.27□□□□□ -0.29
SIL1-202ENST00000394817 VWFP04275 2813 aa13.26□□□□□ -0.29
SIL1-202ENST00000394817 IGHV1-58A0A0C4DH39 117 aa13.26□□□□□ -0.29
SIL1-202ENST00000394817 CIDEAO60543 219 aa13.26□□□□□ -0.29
SIL1-202ENST00000394817 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
SIL1-202ENST00000394817 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
SIL1-202ENST00000394817 ATRQ13535 2644 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 GAGE7O76087 117 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 GAGE12FP0CL80 117 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 GAGE12GP0CL81 117 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 GAGE12IP0CL82 117 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 DGAT2L7PQ6IED9 249 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 VSIG2Q96IQ7 327 aa13.24□□□□□ -0.29
SIL1-202ENST00000394817 CSDC2Q9Y534 153 aaKnown RBP13.24□□□□□ -0.29
SIL1-202ENST00000394817 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 TMEM238C9JI98 176 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 SBSPONQ8IVN8 264 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 SPATA3Q8NHX4 192 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
SIL1-202ENST00000394817 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 K7ERU9 68 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 TIRAPP58753 221 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 GAGE4Q13068 117 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 GAGE5Q13069 117 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
SIL1-202ENST00000394817 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
SIL1-202ENST00000394817 TRBV6-4A0A1B0GX49 114 aa13.22□□□□□ -0.29
SIL1-202ENST00000394817 APOMO95445 188 aa13.22□□□□□ -0.29
SIL1-202ENST00000394817 TSPAN13O95857 204 aa13.22□□□□□ -0.29
SIL1-202ENST00000394817 LINC00694P0DN24 101 aa13.22□□□□□ -0.29
SIL1-202ENST00000394817 CBY1Q9Y3M2 126 aa13.22□□□□□ -0.29
SIL1-202ENST00000394817 CFC1BP0CG36 223 aa13.21□□□□□ -0.29
SIL1-202ENST00000394817 CFC1P0CG37 223 aa13.21□□□□□ -0.29
SIL1-202ENST00000394817 GTSF1LQ9H1H1 148 aa13.21□□□□□ -0.29
SIL1-202ENST00000394817 SPINK8P0C7L1 97 aa13.21□□□□□ -0.3
SIL1-202ENST00000394817 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
SIL1-202ENST00000394817 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
SIL1-202ENST00000394817 INSL3P51460 131 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 LITAFQ99732 161 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 CDKN2A-AS1Q9UH64 79 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 H3BMG7 143 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 RPL24P83731 157 aaKnown RBP13.19□□□□□ -0.3
SIL1-202ENST00000394817 ZFAND6Q6FIF0 208 aa13.19□□□□□ -0.3
SIL1-202ENST00000394817 F8W1H4 67 aa13.18□□□□□ -0.3
SIL1-202ENST00000394817 HERVK_113P63121 156 aa13.18□□□□□ -0.3
SIL1-202ENST00000394817 CITED1Q99966 193 aa13.18□□□□□ -0.3
SIL1-202ENST00000394817 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 A4D1N5 150 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 RNF151Q2KHN1 245 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 LINC00242Q5T6M2 205 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 TMEM243Q9BU79 118 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 PRO1854Q9UHT4 67 aa13.17□□□□□ -0.3
SIL1-202ENST00000394817 LOC100131303A0A0U1RQF7 123 aa13.16□□□□□ -0.3
SIL1-202ENST00000394817 FHL2Q14192 279 aa13.16□□□□□ -0.3
SIL1-202ENST00000394817 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
SIL1-202ENST00000394817 CDC42SE2Q9NRR3 84 aa13.16□□□□□ -0.3
SIL1-202ENST00000394817 A0A0B4J2C4 111 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 A8MZ25 164 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 COX6A2Q02221 97 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 LYRM7Q5U5X0 104 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 H7C423 109 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 TMEM101Q96IK0 257 aa13.15□□□□□ -0.3
SIL1-202ENST00000394817 IGLV5-39A0A0G2JS06 123 aa13.14□□□□□ -0.31
SIL1-202ENST00000394817 EIF4EBP3O60516 100 aaPredicted RBP13.14□□□□□ -0.31
SIL1-202ENST00000394817 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
SIL1-202ENST00000394817 PRO0461Q9UI25 63 aa13.14□□□□□ -0.31
SIL1-202ENST00000394817 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.13□□□□□ -0.31
SIL1-202ENST00000394817 UBE2L6O14933 153 aa13.13□□□□□ -0.31
SIL1-202ENST00000394817 TRRAPQ9Y4A5 3859 aa13.13□□□□□ -0.31
SIL1-202ENST00000394817 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
SIL1-202ENST00000394817 NDUFA1O15239 70 aa13.13□□□□□ -0.31
SIL1-202ENST00000394817 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
SIL1-202ENST00000394817 G3V4G9 280 aa13.12□□□□□ -0.31
SIL1-202ENST00000394817 TIMM17BO60830 172 aa13.12□□□□□ -0.31
SIL1-202ENST00000394817 WFDC2Q14508 124 aa13.12□□□□□ -0.31
SIL1-202ENST00000394817 MIAQ16674 131 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 X6R8D5 127 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 TRAV13-1A0A0B4J241 112 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 ADAMTSL4-AS1Q5T5F5 129 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 VPS25Q9BRG1 176 aa13.11□□□□□ -0.31
SIL1-202ENST00000394817 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
SIL1-202ENST00000394817 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
SIL1-202ENST00000394817 TEX48A0A1B0GUV7 120 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms