RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
RFFL-202ENST00000394597 ZFAND3Q9H8U3 227 aa4.27□□□□□ -1.73
RFFL-202ENST00000394597 RPL18AQ02543 176 aaKnown RBP4.26□□□□□ -1.73
RFFL-202ENST00000394597 MRGPRG-AS1Q2M3A8 158 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 I3L3M4 83 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 Q6ZSV7 163 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 ZNF702PQ9H963 129 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 IGLV1-40P01703 118 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 DMDP11532 3685 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 PSMB8P28062 276 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 TIMM17AQ99595 171 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 JPT2Q9H910 190 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 SPEGQ15772 3267 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 LAMTOR3Q9UHA4 124 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 KLK9Q9UKQ9 250 aa4.26□□□□□ -1.73
RFFL-202ENST00000394597 USP17L23D6RBM5 183 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 GNRH2O43555 120 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 LY6G6DO95868 133 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 C10orf99Q6UWK7 81 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
RFFL-202ENST00000394597 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
RFFL-202ENST00000394597 WDFY4Q6ZS81 3184 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 TRGV1A0A0A0MS02 117 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 CEMP1Q6PRD7 247 aaPredicted RBP4.25□□□□□ -1.73
RFFL-202ENST00000394597 Q9HAA7 133 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 C14orf132Q9NPU4 83 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
RFFL-202ENST00000394597 LST1O00453 97 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 BRI3O95415 125 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 CXCL5P42830 114 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 Q9H8V8 135 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 MGAQ8IWI9 3026 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 TRAV13-2A0A0B4J235 113 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 NRACQ8N912 160 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 AKAP13Q12802 2813 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 INAFM1C9JVW0 142 aa4.24□□□□□ -1.73
RFFL-202ENST00000394597 COX7A2LO14548 114 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 MALP21145 153 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 SEC61GP60059 68 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
RFFL-202ENST00000394597 MIAQ16674 131 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 SPENQ96T58 3664 aaKnown RBP4.23□□□□□ -1.73
RFFL-202ENST00000394597 DEFB1P60022 68 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 TMEM61Q8N0U2 210 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
RFFL-202ENST00000394597 F8W735 103 aaPredicted RBP4.22□□□□□ -1.73
RFFL-202ENST00000394597 NXPH4O95158 308 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 RPL36AP83881 106 aaKnown RBP4.22□□□□□ -1.73
RFFL-202ENST00000394597 SBSPONQ8IVN8 264 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 RPL36ALQ969Q0 106 aaKnown RBP4.22□□□□□ -1.73
RFFL-202ENST00000394597 VPS13AQ96RL7 3174 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 A0A0J9YX75 114 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 K7EQG2 157 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 TIRAPP58753 221 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 HILS1P60008 231 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 KIR2DL5BQ8NHK3 375 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 LINC01006Q8NI28 216 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 U3KQE9 123 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 IGHV1-58A0A0C4DH39 117 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 NDUFC2-KCTD14E9PQ53 114 aa4.22□□□□□ -1.73
RFFL-202ENST00000394597 A0A087WVE0 104 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 IGHV3-53P01767 116 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 DEFB114Q30KQ6 69 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 C20orf173Q96LM9 149 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 ORMDL1Q9P0S3 153 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 LECT2O14960 151 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 CRYGAP11844 174 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 APOC4P55056 127 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 VSIG2Q96IQ7 327 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 SMR3AQ99954 134 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 CNFNQ9BYD5 112 aa4.21□□□□□ -1.74
RFFL-202ENST00000394597 IGHV3-38A0A0C4DH36 116 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 H0YGX0 51 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 ZNRF2Q8NHG8 242 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 PYGO1Q9Y3Y4 419 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 MED14OSP0DP75 135 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 ANKRD17O75179 2603 aaKnown RBP4.2□□□□□ -1.74
RFFL-202ENST00000394597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.2□□□□□ -1.74
RFFL-202ENST00000394597 IGKV2-29A2NJV5 120 aaPredicted RBP4.2□□□□□ -1.74
RFFL-202ENST00000394597 TIMM17BO60830 172 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 DEFB130BP0DP73 79 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 DEFB130AP0DP74 79 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms