RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 LECT2O14960 151 aa12.12□□□□□ -0.47
SCN3B-202ENST00000392770 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
SCN3B-202ENST00000392770 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
SCN3B-202ENST00000392770 Q8N976 141 aa12.11□□□□□ -0.47
SCN3B-202ENST00000392770 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
SCN3B-202ENST00000392770 DIRC1Q969H9 104 aa12.1□□□□□ -0.47
SCN3B-202ENST00000392770 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
SCN3B-202ENST00000392770 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
SCN3B-202ENST00000392770 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
SCN3B-202ENST00000392770 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.47
SCN3B-202ENST00000392770 IGLV1-51P01701 117 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 TCL1BO95988 128 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 TRACP01848 142 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 ACYP1P07311 99 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 LINC00310P59036 64 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 A8MZ25 164 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 UFSP1Q6NVU6 142 aa12.08□□□□□ -0.48
SCN3B-202ENST00000392770 OXLD1Q5BKU9 147 aa12.07□□□□□ -0.48
SCN3B-202ENST00000392770 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
SCN3B-202ENST00000392770 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
SCN3B-202ENST00000392770 COX8CQ7Z4L0 72 aa12.07□□□□□ -0.48
SCN3B-202ENST00000392770 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
SCN3B-202ENST00000392770 IGHV4-30-4P0DP06 118 aa12.06□□□□□ -0.48
SCN3B-202ENST00000392770 B5MCH6 92 aa12.06□□□□□ -0.48
SCN3B-202ENST00000392770 hADV29S1A0JD25 119 aa12.06□□□□□ -0.48
SCN3B-202ENST00000392770 RBX1P62877 108 aa12.06□□□□□ -0.48
SCN3B-202ENST00000392770 ATRXP46100 2492 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 UBE2AP49459 152 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 H3BQ85 93 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 UBE2D3P61077 147 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 UBE2D2P62837 147 aa12.05□□□□□ -0.48
SCN3B-202ENST00000392770 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
SCN3B-202ENST00000392770 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
SCN3B-202ENST00000392770 FOXI1Q12951 378 aa12.04□□□□□ -0.48
SCN3B-202ENST00000392770 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
SCN3B-202ENST00000392770 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 UBE2D1P51668 147 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 KPRPQ5T749 579 aaPredicted RBP12.03□□□□□ -0.48
SCN3B-202ENST00000392770 IBA57-AS1B1ANH7 110 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 NDUFS5O43920 106 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCN3B-202ENST00000392770 PRB2P02812 416 aaPredicted RBP12.03□□□□□ -0.48
SCN3B-202ENST00000392770 COX7BP24311 80 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 SMIM20Q8N5G0 67 aa12.03□□□□□ -0.48
SCN3B-202ENST00000392770 H3BT86 120 aa12.02□□□□□ -0.48
SCN3B-202ENST00000392770 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 C1orf158Q8N1D5 194 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 NAV3Q8IVL0 2385 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 PTH2Q96A98 100 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 CSPG4Q6UVK1 2322 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 IGKV2-24A0A0C4DH68 120 aa12.02□□□□□ -0.49
SCN3B-202ENST00000392770 C2orf91Q6ZV80 131 aa12.01□□□□□ -0.49
SCN3B-202ENST00000392770 LELP1Q5T871 98 aa12.01□□□□□ -0.49
SCN3B-202ENST00000392770 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
SCN3B-202ENST00000392770 A0A0J9YWU9 116 aa12□□□□□ -0.49
SCN3B-202ENST00000392770 IGIPA6NJ69 53 aa12□□□□□ -0.49
SCN3B-202ENST00000392770 RNASE8Q8TDE3 154 aaKnown RBP12□□□□□ -0.49
SCN3B-202ENST00000392770 JMJD7-PLA2G4BH0Y9G9 81 aa11.99□□□□□ -0.49
SCN3B-202ENST00000392770 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
SCN3B-202ENST00000392770 NANOS2P60321 138 aaKnown RBP11.99□□□□□ -0.49
SCN3B-202ENST00000392770 CD164L2Q6UWJ8 174 aa11.99□□□□□ -0.49
SCN3B-202ENST00000392770 COL27A1Q8IZC6 1860 aaPredicted RBP11.99□□□□□ -0.49
SCN3B-202ENST00000392770 Q8N2B8 174 aa11.99□□□□□ -0.49
SCN3B-202ENST00000392770 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
SCN3B-202ENST00000392770 RETNQ9HD89 108 aa11.98□□□□□ -0.49
SCN3B-202ENST00000392770 CDC42SE2Q9NRR3 84 aa11.97□□□□□ -0.49
SCN3B-202ENST00000392770 TET2Q6N021 2002 aaPredicted RBP11.97□□□□□ -0.49
SCN3B-202ENST00000392770 IGKV3D-7A0A0C4DH55 119 aa11.97□□□□□ -0.49
SCN3B-202ENST00000392770 RBM3P98179 157 aaKnown RBP11.96□□□□□ -0.49
SCN3B-202ENST00000392770 RNF183Q96D59 192 aa11.96□□□□□ -0.49
SCN3B-202ENST00000392770 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
SCN3B-202ENST00000392770 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.5
SCN3B-202ENST00000392770 TIMM17BO60830 172 aa11.96□□□□□ -0.5
SCN3B-202ENST00000392770 G3V4G9 280 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 TRIAP1O43715 76 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 CACNA1AO00555 2505 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 XAGE1AQ9HD64 81 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 LINC00526Q96FQ7 95 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
SCN3B-202ENST00000392770 CEP350Q5VT06 3117 aa11.94□□□□□ -0.5
SCN3B-202ENST00000392770 IGLV4-69A0A075B6H9 119 aa11.93□□□□□ -0.5
SCN3B-202ENST00000392770 Q6ZSN1 163 aa11.93□□□□□ -0.5
SCN3B-202ENST00000392770 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
SCN3B-202ENST00000392770 FHL2Q14192 279 aa11.93□□□□□ -0.5
SCN3B-202ENST00000392770 TMEM258P61165 79 aa11.92□□□□□ -0.5
SCN3B-202ENST00000392770 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
SCN3B-202ENST00000392770 NREPQ16612 68 aa11.92□□□□□ -0.5
SCN3B-202ENST00000392770 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
SCN3B-202ENST00000392770 PIEZO1Q92508 2521 aa11.92□□□□□ -0.5
SCN3B-202ENST00000392770 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
SCN3B-202ENST00000392770 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
SCN3B-202ENST00000392770 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.9□□□□□ -0.5
SCN3B-202ENST00000392770 SLPIP03973 132 aa11.9□□□□□ -0.5
SCN3B-202ENST00000392770 BEAN1Q3B7T3 259 aa11.9□□□□□ -0.5
SCN3B-202ENST00000392770 IGLV2-18A0A075B6J9 118 aa11.9□□□□□ -0.5
SCN3B-202ENST00000392770 PCNTO95613 3336 aa11.9□□□□□ -0.5
SCN3B-202ENST00000392770 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
SCN3B-202ENST00000392770 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms