RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 DGAT2L7PQ6IED9 249 aa13.56□□□□□ -0.24
ERCC2-203ENST00000391944 TRGV4A0A0C4DH28 118 aa13.55□□□□□ -0.24
ERCC2-203ENST00000391944 C12orf74Q32Q52 190 aa13.55□□□□□ -0.24
ERCC2-203ENST00000391944 SRSF9Q13242 221 aaKnown RBP eCLIP13.55□□□□□ -0.24
ERCC2-203ENST00000391944 FHL2Q14192 279 aa13.55□□□□□ -0.24
ERCC2-203ENST00000391944 OR5A1Q8NGJ0 315 aa13.55□□□□□ -0.24
ERCC2-203ENST00000391944 KIR2DL5BQ8NHK3 375 aa13.55□□□□□ -0.24
ERCC2-203ENST00000391944 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
ERCC2-203ENST00000391944 UBE2D1P51668 147 aa13.54□□□□□ -0.24
ERCC2-203ENST00000391944 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
ERCC2-203ENST00000391944 GTSF1LQ9H1H1 148 aa13.54□□□□□ -0.24
ERCC2-203ENST00000391944 CSDC2Q9Y534 153 aaKnown RBP13.54□□□□□ -0.24
ERCC2-203ENST00000391944 IGHV3-64A0A075B6Q5 118 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 A0A1B0GWB2 263 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 GAGE10A6NGK3 116 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 SMIM9A6NGZ8 99 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 SPANXB1Q9NS25 103 aaPredicted RBP13.53□□□□□ -0.24
ERCC2-203ENST00000391944 X6R8D5 127 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
ERCC2-203ENST00000391944 LINC00612Q8N6U2 182 aa13.52□□□□□ -0.24
ERCC2-203ENST00000391944 WFDC9Q8NEX5 89 aa13.52□□□□□ -0.24
ERCC2-203ENST00000391944 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.25
ERCC2-203ENST00000391944 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
ERCC2-203ENST00000391944 GTF2H5Q6ZYL4 71 aa13.51□□□□□ -0.25
ERCC2-203ENST00000391944 IGHV1-58A0A0C4DH39 117 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 TIRAPP58753 221 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 SMAGPQ0VAQ4 97 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
ERCC2-203ENST00000391944 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 A6NJY4 79 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 K7EP34 96 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 FABP2P12104 132 aa13.5□□□□□ -0.25
ERCC2-203ENST00000391944 TRAV8-3A0A0A6YYJ7 113 aa13.49□□□□□ -0.25
ERCC2-203ENST00000391944 IGLL5B9A064 214 aa13.49□□□□□ -0.25
ERCC2-203ENST00000391944 DEFB130BP0DP73 79 aa13.49□□□□□ -0.25
ERCC2-203ENST00000391944 DEFB130AP0DP74 79 aa13.49□□□□□ -0.25
ERCC2-203ENST00000391944 IGLV5-45A0A087WSX0 123 aa13.48□□□□□ -0.25
ERCC2-203ENST00000391944 VSIG2Q96IQ7 327 aa13.48□□□□□ -0.25
ERCC2-203ENST00000391944 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
ERCC2-203ENST00000391944 IGHV3-30P01768 117 aa13.48□□□□□ -0.25
ERCC2-203ENST00000391944 IGHV3-30-5P0DP03 117 aa13.48□□□□□ -0.25
ERCC2-203ENST00000391944 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 F8P00451 2351 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 CDC42SE2Q9NRR3 84 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 WIPF1O43516 503 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 APOC4P55056 127 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 C10orf126Q8N4M7 172 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 SPCS1Q9Y6A9 102 aa13.47□□□□□ -0.25
ERCC2-203ENST00000391944 H7C423 109 aa13.46□□□□□ -0.25
ERCC2-203ENST00000391944 CDKN2A-AS1Q9UH64 79 aa13.46□□□□□ -0.25
ERCC2-203ENST00000391944 UBE2L6O14933 153 aa13.46□□□□□ -0.26
ERCC2-203ENST00000391944 SPINK8P0C7L1 97 aa13.46□□□□□ -0.26
ERCC2-203ENST00000391944 FLNBO75369 2602 aaKnown RBP13.46□□□□□ -0.26
ERCC2-203ENST00000391944 LINC00242Q5T6M2 205 aa13.45□□□□□ -0.26
ERCC2-203ENST00000391944 A0A0J9YXY3 114 aa13.45□□□□□ -0.26
ERCC2-203ENST00000391944 HERVK_113P63121 156 aa13.45□□□□□ -0.26
ERCC2-203ENST00000391944 COX6A2Q02221 97 aa13.45□□□□□ -0.26
ERCC2-203ENST00000391944 TRRAPQ9Y4A5 3859 aa13.44□□□□□ -0.26
ERCC2-203ENST00000391944 DEFB135Q30KP9 77 aa13.44□□□□□ -0.26
ERCC2-203ENST00000391944 TMEM101Q96IK0 257 aa13.44□□□□□ -0.26
ERCC2-203ENST00000391944 LYRM9A8MSI8 78 aa13.43□□□□□ -0.26
ERCC2-203ENST00000391944 TRBV6-8A0A0A6YYG3 113 aa13.42□□□□□ -0.26
ERCC2-203ENST00000391944 NDUFA12Q9UI09 145 aa13.42□□□□□ -0.26
ERCC2-203ENST00000391944 TMEM238C9JI98 176 aa13.42□□□□□ -0.26
ERCC2-203ENST00000391944 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
ERCC2-203ENST00000391944 TRAV13-1A0A0B4J241 112 aa13.41□□□□□ -0.26
ERCC2-203ENST00000391944 A8MZ25 164 aa13.41□□□□□ -0.26
ERCC2-203ENST00000391944 ZFAND6Q6FIF0 208 aa13.41□□□□□ -0.26
ERCC2-203ENST00000391944 PRO0255Q9UI72 69 aa13.4□□□□□ -0.26
ERCC2-203ENST00000391944 APOMO95445 188 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 LITAFQ99732 161 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 CFC1BP0CG36 223 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 CFC1P0CG37 223 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 GYPEP15421 78 aa13.39□□□□□ -0.27
ERCC2-203ENST00000391944 GAGE6Q13070 117 aa13.38□□□□□ -0.27
ERCC2-203ENST00000391944 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
ERCC2-203ENST00000391944 MUSTN1Q8IVN3 82 aa13.38□□□□□ -0.27
ERCC2-203ENST00000391944 ATP6V0E2Q8NHE4 81 aa13.37□□□□□ -0.27
ERCC2-203ENST00000391944 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
ERCC2-203ENST00000391944 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
ERCC2-203ENST00000391944 CHCHD5Q9BSY4 110 aa13.36□□□□□ -0.27
ERCC2-203ENST00000391944 A4D1N5 150 aa13.36□□□□□ -0.27
ERCC2-203ENST00000391944 DEFB4AO15263 64 aa13.36□□□□□ -0.27
ERCC2-203ENST00000391944 MIFP14174 115 aa13.36□□□□□ -0.27
ERCC2-203ENST00000391944 NDUFA1O15239 70 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 KRTAP24-1Q3LI83 254 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 Q8NAQ8 132 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 SMIM1B2RUZ4 78 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 TSPAN13O95857 204 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 SPANXDQ9BXN6 97 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 SPANXCQ9NY87 97 aa13.35□□□□□ -0.27
ERCC2-203ENST00000391944 IGLV4-60A0A075B6I1 120 aa13.34□□□□□ -0.27
ERCC2-203ENST00000391944 F5H768 121 aa13.34□□□□□ -0.27
ERCC2-203ENST00000391944 ADAMTSL4-AS1Q5T5F5 129 aa13.34□□□□□ -0.27
ERCC2-203ENST00000391944 RNF183Q96D59 192 aa13.34□□□□□ -0.27
ERCC2-203ENST00000391944 TIMM17BO60830 172 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms