RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 C22orf34Q6ZV56 151 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 LINC00467Q9BRT7 94 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 H7C423 109 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 SPAG11BQ08648 103 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 Q6ZS46 218 aa14.72□□□□□ -0.05
SHANK1-203ENST00000391813 IGHV4-28A0A0C4DH34 117 aa14.71□□□□□ -0.05
SHANK1-203ENST00000391813 ENHOQ6UWT2 76 aa14.71□□□□□ -0.05
SHANK1-203ENST00000391813 DNAJC9-AS1A6NH13 148 aa14.71□□□□□ -0.06
SHANK1-203ENST00000391813 IGF1P05019 195 aa14.71□□□□□ -0.06
SHANK1-203ENST00000391813 ANKRD11Q6UB99 2663 aaPredicted RBP14.7□□□□□ -0.06
SHANK1-203ENST00000391813 UBE2BP63146 152 aa14.7□□□□□ -0.06
SHANK1-203ENST00000391813 LY6LH3BQJ8 138 aa14.7□□□□□ -0.06
SHANK1-203ENST00000391813 BPY2O14599 106 aa14.7□□□□□ -0.06
SHANK1-203ENST00000391813 SVIPQ8NHG7 77 aa14.69□□□□□ -0.06
SHANK1-203ENST00000391813 K7EQG2 157 aa14.69□□□□□ -0.06
SHANK1-203ENST00000391813 C20orf173Q96LM9 149 aa14.69□□□□□ -0.06
SHANK1-203ENST00000391813 COX7BP24311 80 aa14.68□□□□□ -0.06
SHANK1-203ENST00000391813 C11orf21Q9P2W6 132 aa14.68□□□□□ -0.06
SHANK1-203ENST00000391813 SPTBN4Q9H254 2564 aa14.68□□□□□ -0.06
SHANK1-203ENST00000391813 IGKV2D-24A0A075B6R9 120 aa14.68□□□□□ -0.06
SHANK1-203ENST00000391813 NDUFB1O75438 58 aa14.67□□□□□ -0.06
SHANK1-203ENST00000391813 GAS8-AS1O95177 125 aa14.67□□□□□ -0.06
SHANK1-203ENST00000391813 V9GYY9 64 aa14.67□□□□□ -0.06
SHANK1-203ENST00000391813 C4orf3Q8WVX3 66 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 LINC00526Q96FQ7 95 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 RNASE3P12724 160 aaKnown RBP14.66□□□□□ -0.06
SHANK1-203ENST00000391813 PIK3CD-AS1Q5SR53 167 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 Q6YL49 198 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 FAM110AQ9BQ89 295 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 Q6JHZ5 121 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 NUP210LQ5VU65 1888 aa14.66□□□□□ -0.06
SHANK1-203ENST00000391813 LINC00694P0DN24 101 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 LRP4O75096 1905 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 ATG2AQ2TAZ0 1938 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 A0A096LNJ9 63 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 M0QXV9 152 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 TSHBP01222 138 aa14.65□□□□□ -0.06
SHANK1-203ENST00000391813 IGIPA6NJ69 53 aa14.64□□□□□ -0.07
SHANK1-203ENST00000391813 PKIGQ9Y2B9 76 aa14.64□□□□□ -0.07
SHANK1-203ENST00000391813 SMIM9A6NGZ8 99 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 LINC01548A6NM66 108 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 SPART-AS1P0CW21 52 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 COX8CQ7Z4L0 72 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 NDUFS5O43920 106 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 MPLKIPQ8TAP9 179 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 PRO0255Q9UI72 69 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 ABCA2Q9BZC7 2435 aa14.62□□□□□ -0.07
SHANK1-203ENST00000391813 INAFM1C9JVW0 142 aa14.61□□□□□ -0.07
SHANK1-203ENST00000391813 MRPS36P82909 103 aaKnown RBP14.61□□□□□ -0.07
SHANK1-203ENST00000391813 SLPIP03973 132 aa14.61□□□□□ -0.07
SHANK1-203ENST00000391813 MRPL55Q7Z7F7 128 aaKnown RBP14.61□□□□□ -0.07
SHANK1-203ENST00000391813 MAP6D1Q9H9H5 199 aa14.6□□□□□ -0.07
SHANK1-203ENST00000391813 KLLNB2CW77 178 aa14.59□□□□□ -0.07
SHANK1-203ENST00000391813 PRB2P02812 416 aaPredicted RBP14.59□□□□□ -0.07
SHANK1-203ENST00000391813 SMIM26A0A096LP01 95 aa14.59□□□□□ -0.07
SHANK1-203ENST00000391813 SHISA2Q6UWI4 295 aa14.59□□□□□ -0.07
SHANK1-203ENST00000391813 TANC2Q9HCD6 1990 aa14.57□□□□□ -0.08
SHANK1-203ENST00000391813 A0A0U1RQV1 116 aa14.57□□□□□ -0.08
SHANK1-203ENST00000391813 PRR9Q5T870 116 aa14.57□□□□□ -0.08
SHANK1-203ENST00000391813 SORL1Q92673 2214 aa14.57□□□□□ -0.08
SHANK1-203ENST00000391813 Q6ZTI0 123 aa14.57□□□□□ -0.08
SHANK1-203ENST00000391813 CRYGDP07320 174 aa14.56□□□□□ -0.08
SHANK1-203ENST00000391813 PSMG3-AS1Q96PY0 264 aa14.56□□□□□ -0.08
SHANK1-203ENST00000391813 MYO9AB2RTY4 2548 aa14.56□□□□□ -0.08
SHANK1-203ENST00000391813 LY6G6DO95868 133 aa14.56□□□□□ -0.08
SHANK1-203ENST00000391813 A8MZ25 164 aa14.55□□□□□ -0.08
SHANK1-203ENST00000391813 C9orf85Q96MD7 179 aa14.55□□□□□ -0.08
SHANK1-203ENST00000391813 EML5Q05BV3 1969 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 Q8N6K4 173 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 CDIP1Q9H305 208 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 UBE2D4Q9Y2X8 147 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 CRIP2P52943 208 aaPredicted RBP14.54□□□□□ -0.08
SHANK1-203ENST00000391813 C6orf99Q4VX62 202 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 KLK12Q9UKR0 248 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 ARHGAP32A7KAX9 2087 aa14.54□□□□□ -0.08
SHANK1-203ENST00000391813 POM121L12Q8N7R1 296 aa14.53□□□□□ -0.08
SHANK1-203ENST00000391813 IGLV4-69A0A075B6H9 119 aa14.53□□□□□ -0.08
SHANK1-203ENST00000391813 CHKB-CPT1BH3BT56 60 aa14.53□□□□□ -0.08
SHANK1-203ENST00000391813 FAM19A3Q7Z5A8 133 aa14.53□□□□□ -0.08
SHANK1-203ENST00000391813 PRRC2AP48634 2157 aaKnown RBP14.52□□□□□ -0.09
SHANK1-203ENST00000391813 SMIM11BQ8TCY0 68 aa14.51□□□□□ -0.09
SHANK1-203ENST00000391813 SERP1Q9Y6X1 66 aa14.51□□□□□ -0.09
SHANK1-203ENST00000391813 SPTSSBQ8NFR3 76 aa14.5□□□□□ -0.09
SHANK1-203ENST00000391813 IL17DQ8TAD2 202 aa14.5□□□□□ -0.09
SHANK1-203ENST00000391813 IGLV2-18A0A075B6J9 118 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 TRBV6-4A0A1B0GX49 114 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 HRCT1Q6UXD1 115 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 CDSNQ15517 529 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 SCXQ7RTU7 201 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 TRAV7A0A075B6U4 112 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 TRBV6-8A0A0A6YYG3 113 aa14.49□□□□□ -0.09
SHANK1-203ENST00000391813 Q6ZSV7 163 aa14.48□□□□□ -0.09
SHANK1-203ENST00000391813 ZFYVE26Q68DK2 2539 aa14.48□□□□□ -0.09
SHANK1-203ENST00000391813 REG3AQ06141 175 aa14.48□□□□□ -0.09
SHANK1-203ENST00000391813 SNURFQ9Y675 71 aa14.48□□□□□ -0.09
SHANK1-203ENST00000391813 FASNP49327 2511 aaKnown RBP14.48□□□□□ -0.09
SHANK1-203ENST00000391813 C1orf195Q5TG92 126 aa14.48□□□□□ -0.09
SHANK1-203ENST00000391813 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
SHANK1-203ENST00000391813 PROK1P58294 105 aa14.47□□□□□ -0.09
SHANK1-203ENST00000391813 CHCHD10Q8WYQ3 142 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms