RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 RNF17Q9BXT8 1623 aaKnown RBP-0.16□□□□□ -2.43
RNU6-48P-201ENST00000384161 ARHGEF12Q9NZN5 1544 aa-0.16□□□□□ -2.43
RNU6-48P-201ENST00000384161 PREX1Q8TCU6 1659 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 SLC25A5P05141 298 aaKnown RBP-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 HSD17B12Q53GQ0 312 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 TMEM128Q5BJH2 165 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 TMEM35BQ8NCS4 154 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 DEFB104AQ8WTQ1 72 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 U3KQA8 63 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 MARF1Q9Y4F3 1742 aaKnown RBP-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 CCDC171Q6TFL3 1326 aa-0.16□□□□□ -2.44
RNU6-48P-201ENST00000384161 ARHGEF10O15013 1369 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 TRAV17A0A0B4J275 112 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 OVOS2A0A0G2JMS6 1433 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 ZNF670-ZNF695F2Z2N8 137 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 AKR1D1P51857 326 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 EMX2Q04743 252 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 NDUFA11Q86Y39 141 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 SKA2Q8WVK7 121 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 SLC35B3Q9H1N7 401 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 NCOA3Q9Y6Q9 1424 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 RGPD8O14715 1765 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 RGPD5Q99666 1765 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 USP32Q8NFA0 1604 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 UHRF1BP1LA0JNW5 1464 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 MYOM2P54296 1465 aa-0.17□□□□□ -2.44
RNU6-48P-201ENST00000384161 EPRSP07814 1512 aaKnown RBP-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 DUOX2Q9NRD8 1548 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 CXorf51AA0A1B0GTR3 108 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 RBAKDNA6NC62 111 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 DPM2O94777 84 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 TCRAP04437 139 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 DDA1Q9BW61 102 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 NDUFAF1Q9Y375 327 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 ROBO1Q9Y6N7 1651 aa-0.18□□□□□ -2.44
RNU6-48P-201ENST00000384161 J3KT08 172 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 YPEL1O60688 119 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 FABP1P07148 127 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 S100GP29377 79 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 ELOF1P60002 83 aaKnown RBP-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 RPS28P62857 69 aaKnown RBP-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 SLC25A26Q70HW3 274 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 OR8I2Q8N0Y5 310 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 MAGOHBQ96A72 148 aaKnown RBP-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 AKAP11Q9UKA4 1901 aa-0.19□□□□□ -2.44
RNU6-48P-201ENST00000384161 TOPAZ1Q8N9V7 1692 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 LRRC9Q6ZRR7 1453 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 SPHKAPQ2M3C7 1700 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 NUP188Q5SRE5 1749 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 TCRBV3S1A0A5B6 114 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 MT1HL1P0DM35 61 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 COX6B1P14854 86 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 DEFB121Q5J5C9 76 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 SMIM11BQ8TCY0 68 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 LAMB1P07942 1786 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 PARP14Q460N5 1801 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 DOCK11Q5JSL3 2073 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 KIF14Q15058 1648 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 NRXN3Q9Y4C0 1643 aa-0.2□□□□□ -2.44
RNU6-48P-201ENST00000384161 RGPD1P0DJD0 1748 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 PRDM15P57071 1507 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 UGGT2Q9NYU1 1516 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 TSC2P49815 1807 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 SPAARA0A1B0GVQ0 90 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 A0A1B0GW64 132 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 SMIM24O75264 130 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 RBP4P02753 201 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 APODP05090 189 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 MT1BP07438 61 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 PAEPP09466 180 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 COX4I1P13073 169 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 OR8B8Q15620 311 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 TMEM91Q6ZNR0 172 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 CYP2G1PQ6ZSU1 146 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 SMIM15Q7Z3B0 74 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 DEFB124Q8NES8 71 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 ATP6V0E2Q8NHE4 81 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 SPANXCQ9NY87 97 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 ERG28Q9UKR5 140 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 ADCY10Q96PN6 1610 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 SHPRHQ149N8 1683 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 FMN2Q9NZ56 1722 aa-0.21□□□□□ -2.44
RNU6-48P-201ENST00000384161 PHIPQ8WWQ0 1821 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 GVQW2A0A096LPI5 108 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 BORCS7-ASMTA0A0B4J1R7 106 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 TSTD3H0UI37 97 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 S100A5P33763 92 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 SSBP1Q04837 148 aaKnown RBP-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 OR2T2Q6IF00 324 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 DYNLRB2Q8TF09 96 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 TMEM242Q9NWH2 141 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 HSPB11Q9Y547 144 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 CROCC2H7BZ55 1655 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 A0A0G2JMZ2 1700 aa-0.22□□□□□ -2.44
RNU6-48P-201ENST00000384161 PLCH1Q4KWH8 1693 aa-0.23□□□□□ -2.45
RNU6-48P-201ENST00000384161 TRAV36DV7A0A075B6V5 113 aa-0.23□□□□□ -2.45
RNU6-48P-201ENST00000384161 A0A1B0GX51 115 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms