RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 TRGV2A0A075B6R0 118 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 OCIAD2Q56VL3 154 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 IGHV1-58A0A0C4DH39 117 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 GAGE12JA6NER3 117 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 GAGE4Q13068 117 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 GAGE5Q13069 117 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 GAGE13Q4V321 117 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 DGAT2L7PQ6IED9 249 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 NTM-AS1Q6ZSK4 140 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 C10orf126Q8N4M7 172 aa15.26■□□□□ 0.03
CNTFR-202ENST00000378980 TRAV8-3A0A0A6YYJ7 113 aa15.25■□□□□ 0.03
CNTFR-202ENST00000378980 CIDEAO60543 219 aa15.25■□□□□ 0.03
CNTFR-202ENST00000378980 PGPEP1Q9NXJ5 209 aa15.24■□□□□ 0.03
CNTFR-202ENST00000378980 LINC00694P0DN24 101 aa15.24■□□□□ 0.03
CNTFR-202ENST00000378980 FN1P02751 2386 aaKnown RBP15.23■□□□□ 0.03
CNTFR-202ENST00000378980 RBX1P62877 108 aa15.23■□□□□ 0.03
CNTFR-202ENST00000378980 SBSPONQ8IVN8 264 aa15.23■□□□□ 0.03
CNTFR-202ENST00000378980 VSIG2Q96IQ7 327 aa15.23■□□□□ 0.03
CNTFR-202ENST00000378980 GEMIN7Q9H840 131 aaKnown RBP15.23■□□□□ 0.03
CNTFR-202ENST00000378980 A0A0J9YXY3 114 aa15.22■□□□□ 0.03
CNTFR-202ENST00000378980 TRBV6-4A0A1B0GX49 114 aa15.22■□□□□ 0.03
CNTFR-202ENST00000378980 CSDC2Q9Y534 153 aaKnown RBP15.22■□□□□ 0.03
CNTFR-202ENST00000378980 IGLV5-45A0A087WSX0 123 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 APOMO95445 188 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 TIRAPP58753 221 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 CBY1Q9Y3M2 126 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 TMEM238C9JI98 176 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 SPINK8P0C7L1 97 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 INSL3P51460 131 aa15.21■□□□□ 0.03
CNTFR-202ENST00000378980 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
CNTFR-202ENST00000378980 TSPAN13O95857 204 aa15.2■□□□□ 0.02
CNTFR-202ENST00000378980 CFC1BP0CG36 223 aa15.2■□□□□ 0.02
CNTFR-202ENST00000378980 CFC1P0CG37 223 aa15.2■□□□□ 0.02
CNTFR-202ENST00000378980 SPATA3Q8NHX4 192 aa15.2■□□□□ 0.02
CNTFR-202ENST00000378980 VWFP04275 2813 aa15.19■□□□□ 0.02
CNTFR-202ENST00000378980 TRGV4A0A0C4DH28 118 aa15.19■□□□□ 0.02
CNTFR-202ENST00000378980 LOC100131303A0A0U1RQF7 123 aa15.19■□□□□ 0.02
CNTFR-202ENST00000378980 CDKN2A-AS1Q9UH64 79 aa15.19■□□□□ 0.02
CNTFR-202ENST00000378980 RNF151Q2KHN1 245 aa15.18■□□□□ 0.02
CNTFR-202ENST00000378980 C9orf66Q5T8R8 295 aa15.18■□□□□ 0.02
CNTFR-202ENST00000378980 NDUFA12Q9UI09 145 aa15.18■□□□□ 0.02
CNTFR-202ENST00000378980 CRLF1O75462 422 aa15.18■□□□□ 0.02
CNTFR-202ENST00000378980 FAM19A3Q7Z5A8 133 aa15.18■□□□□ 0.02
CNTFR-202ENST00000378980 SMAGPQ0VAQ4 97 aa15.17■□□□□ 0.02
CNTFR-202ENST00000378980 FHL2Q14192 279 aa15.17■□□□□ 0.02
CNTFR-202ENST00000378980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.17■□□□□ 0.02
CNTFR-202ENST00000378980 LITAFQ99732 161 aa15.17■□□□□ 0.02
CNTFR-202ENST00000378980 A8MZ25 164 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 LINC00242Q5T6M2 205 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 TMEM243Q9BU79 118 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 HIVEP1P15822 2718 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 A4D1N5 150 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 H3BMG7 143 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 K7ERU9 68 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 HERVK_113P63121 156 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 COX6A2Q02221 97 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 ZFAND6Q6FIF0 208 aa15.16■□□□□ 0.02
CNTFR-202ENST00000378980 MUSTN1Q8IVN3 82 aa15.15■□□□□ 0.02
CNTFR-202ENST00000378980 CDC42SE2Q9NRR3 84 aa15.15■□□□□ 0.02
CNTFR-202ENST00000378980 RPL24P83731 157 aaKnown RBP15.15■□□□□ 0.02
CNTFR-202ENST00000378980 KIR2DL5BQ8NHK3 375 aa15.15■□□□□ 0.02
CNTFR-202ENST00000378980 UBE2L6O14933 153 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 LINC00612Q8N6U2 182 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 TMEM101Q96IK0 257 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 TENM1Q9UKZ4 2725 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 F8W1H4 67 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 PRO1854Q9UHT4 67 aa15.13■□□□□ 0.01
CNTFR-202ENST00000378980 X6R8D5 127 aa15.12■□□□□ 0.01
CNTFR-202ENST00000378980 TRAV13-1A0A0B4J241 112 aa15.12■□□□□ 0.01
CNTFR-202ENST00000378980 H7C423 109 aa15.12■□□□□ 0.01
CNTFR-202ENST00000378980 EIF4EBP3O60516 100 aaPredicted RBP15.12■□□□□ 0.01
CNTFR-202ENST00000378980 SPANXDQ9BXN6 97 aa15.12■□□□□ 0.01
CNTFR-202ENST00000378980 SPANXCQ9NY87 97 aa15.12■□□□□ 0.01
CNTFR-202ENST00000378980 IGLV5-39A0A0G2JS06 123 aa15.11■□□□□ 0.01
CNTFR-202ENST00000378980 CITED1Q99966 193 aa15.11■□□□□ 0.01
CNTFR-202ENST00000378980 A0A0B4J2C4 111 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 LOC107984156A0A0G2JMH3 177 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 DEFB130BP0DP73 79 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 DEFB130AP0DP74 79 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 ARL17AQ8IVW1 177 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 SMIM9A6NGZ8 99 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 ADAMTSL4-AS1Q5T5F5 129 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 SFTA2Q6UW10 78 aa15.1■□□□□ 0.01
CNTFR-202ENST00000378980 NDUFA1O15239 70 aa15.09■□□□□ 0.01
CNTFR-202ENST00000378980 LYRM7Q5U5X0 104 aa15.09■□□□□ 0.01
CNTFR-202ENST00000378980 PRO0461Q9UI25 63 aa15.09■□□□□ 0.01
CNTFR-202ENST00000378980 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.08■□□□□ 0.01
CNTFR-202ENST00000378980 WFDC2Q14508 124 aa15.08■□□□□ 0
CNTFR-202ENST00000378980 MIAQ16674 131 aa15.08■□□□□ 0
CNTFR-202ENST00000378980 TRBV6-8A0A0A6YYG3 113 aa15.07■□□□□ 0
CNTFR-202ENST00000378980 SMIM1B2RUZ4 78 aa15.07■□□□□ 0
CNTFR-202ENST00000378980 TIMM17BO60830 172 aa15.07■□□□□ 0
CNTFR-202ENST00000378980 VPS25Q9BRG1 176 aa15.07■□□□□ 0
CNTFR-202ENST00000378980 IGHV3-33P01772 117 aa15.06■□□□□ 0
CNTFR-202ENST00000378980 G3V4G9 280 aa15.05■□□□□ 0
CNTFR-202ENST00000378980 PRSS2P07478 247 aa15.05■□□□□ 0
CNTFR-202ENST00000378980 F5H768 121 aa15.05■□□□□ -0
CNTFR-202ENST00000378980 GAGE6Q13070 117 aa15.05■□□□□ -0
CNTFR-202ENST00000378980 PSMB2P49721 201 aa15.04■□□□□ -0
CNTFR-202ENST00000378980 MTURNQ8N3F0 131 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms