RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LINC00322Q6ZN03 302 aaPredicted RBP12.16□□□□□ -0.46
RGP1-201ENST00000378078 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
RGP1-201ENST00000378078 Q6ZS46 218 aa12.15□□□□□ -0.46
RGP1-201ENST00000378078 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.47
RGP1-201ENST00000378078 ESRGQ1W209 222 aa12.14□□□□□ -0.47
RGP1-201ENST00000378078 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
RGP1-201ENST00000378078 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
RGP1-201ENST00000378078 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 LMO4P61968 165 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 MIFP14174 115 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 Q6Q795 121 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
RGP1-201ENST00000378078 PRYO14603 147 aa12.12□□□□□ -0.47
RGP1-201ENST00000378078 DEFB116Q30KQ4 102 aa12.12□□□□□ -0.47
RGP1-201ENST00000378078 KRTAP27-1Q3LI81 207 aa12.12□□□□□ -0.47
RGP1-201ENST00000378078 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
RGP1-201ENST00000378078 SERP2Q8N6R1 65 aa12.12□□□□□ -0.47
RGP1-201ENST00000378078 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
RGP1-201ENST00000378078 SPATA12Q7Z6I5 190 aa12.11□□□□□ -0.47
RGP1-201ENST00000378078 ZNF706Q9Y5V0 76 aaPredicted RBP12.11□□□□□ -0.47
RGP1-201ENST00000378078 IGHV6-1A0A0B4J1U7 121 aa12.11□□□□□ -0.47
RGP1-201ENST00000378078 EDN2P20800 178 aa12.11□□□□□ -0.47
RGP1-201ENST00000378078 ATG2AQ2TAZ0 1938 aa12.1□□□□□ -0.47
RGP1-201ENST00000378078 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
RGP1-201ENST00000378078 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
RGP1-201ENST00000378078 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
RGP1-201ENST00000378078 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
RGP1-201ENST00000378078 LOC107984640A0A0U1RRK4 108 aa12.09□□□□□ -0.47
RGP1-201ENST00000378078 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
RGP1-201ENST00000378078 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
RGP1-201ENST00000378078 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
RGP1-201ENST00000378078 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
RGP1-201ENST00000378078 LINC01556Q5JQF7 62 aa12.09□□□□□ -0.47
RGP1-201ENST00000378078 C10orf25Q5T742 122 aa12.09□□□□□ -0.47
RGP1-201ENST00000378078 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
RGP1-201ENST00000378078 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
RGP1-201ENST00000378078 TRIAP1O43715 76 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 PCDH15Q96QU1 1955 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 M0QXV9 152 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 LINC00308Q8TCZ7 52 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 Q8N9L7 120 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 PLA2G2AP14555 144 aa12.07□□□□□ -0.48
RGP1-201ENST00000378078 K7EQG2 157 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
RGP1-201ENST00000378078 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
RGP1-201ENST00000378078 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
RGP1-201ENST00000378078 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 Q6ZQY7 126 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 ODF3BA8MYP8 253 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 NDUFA7O95182 113 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 H3BT86 120 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 PDE6GP18545 87 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 LINC01006Q8NI28 216 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 RBX1P62877 108 aa12.05□□□□□ -0.48
RGP1-201ENST00000378078 PCOTHQ58A44 107 aa12.03□□□□□ -0.48
RGP1-201ENST00000378078 WNK1Q9H4A3 2382 aa12.03□□□□□ -0.48
RGP1-201ENST00000378078 COL5A1P20908 1838 aaPredicted RBP12.03□□□□□ -0.48
RGP1-201ENST00000378078 PRR3P79522 188 aaKnown RBP12.03□□□□□ -0.48
RGP1-201ENST00000378078 LINC00643Q86TS7 51 aa12.03□□□□□ -0.48
RGP1-201ENST00000378078 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
RGP1-201ENST00000378078 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
RGP1-201ENST00000378078 PCNX3Q9H6A9 2034 aa12.03□□□□□ -0.48
RGP1-201ENST00000378078 C6orf223Q8N319 242 aa12.02□□□□□ -0.48
RGP1-201ENST00000378078 HIGD1BQ9P298 99 aa12.02□□□□□ -0.48
RGP1-201ENST00000378078 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.49
RGP1-201ENST00000378078 FAM240AA0A1B0GVK7 77 aa12.02□□□□□ -0.49
RGP1-201ENST00000378078 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.49
RGP1-201ENST00000378078 MED13LQ71F56 2210 aa12.02□□□□□ -0.49
RGP1-201ENST00000378078 M0R378 163 aa12.01□□□□□ -0.49
RGP1-201ENST00000378078 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
RGP1-201ENST00000378078 SBSPONQ8IVN8 264 aa12.01□□□□□ -0.49
RGP1-201ENST00000378078 M0QY20 66 aa12□□□□□ -0.49
RGP1-201ENST00000378078 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
RGP1-201ENST00000378078 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
RGP1-201ENST00000378078 NBASA2RRP1 2371 aa12□□□□□ -0.49
RGP1-201ENST00000378078 H7C423 109 aa11.99□□□□□ -0.49
RGP1-201ENST00000378078 HCFC1P51610 2035 aa11.99□□□□□ -0.49
RGP1-201ENST00000378078 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
RGP1-201ENST00000378078 CRIP1P50238 77 aa11.99□□□□□ -0.49
RGP1-201ENST00000378078 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
RGP1-201ENST00000378078 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
RGP1-201ENST00000378078 MRPS12O15235 138 aaKnown RBP11.98□□□□□ -0.49
RGP1-201ENST00000378078 LELP1Q5T871 98 aa11.97□□□□□ -0.49
RGP1-201ENST00000378078 Q6ZSR3 168 aa11.96□□□□□ -0.49
RGP1-201ENST00000378078 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
RGP1-201ENST00000378078 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
RGP1-201ENST00000378078 FSHBP01225 129 aa11.96□□□□□ -0.49
RGP1-201ENST00000378078 XGP55808 180 aa11.96□□□□□ -0.49
RGP1-201ENST00000378078 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.5
RGP1-201ENST00000378078 MBD6Q96DN6 1003 aa11.96□□□□□ -0.5
RGP1-201ENST00000378078 PRR9Q5T870 116 aa11.96□□□□□ -0.5
RGP1-201ENST00000378078 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
RGP1-201ENST00000378078 KRTAP10-9P60411 292 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms