RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 JPT2Q9H910 190 aa8.89□□□□□ -0.99
VRK3-202ENST00000377011 CRYBA4P53673 196 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 MUC7Q8TAX7 377 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 VCX2Q9H322 139 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
VRK3-202ENST00000377011 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 MDFICQ9P1T7 246 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 MUC4Q99102 2169 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 TRBV20-1A0A075B6N2 111 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 A0A0J9YY99 117 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 I3L3M4 83 aa8.88□□□□□ -0.99
VRK3-202ENST00000377011 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
VRK3-202ENST00000377011 CASC10Q5T4H9 136 aa8.87□□□□□ -0.99
VRK3-202ENST00000377011 FAM74A4Q5TZK3 123 aa8.87□□□□□ -0.99
VRK3-202ENST00000377011 C20orf203Q8NBC4 194 aa8.87□□□□□ -0.99
VRK3-202ENST00000377011 AZU1P20160 251 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 UBE2D3P61077 147 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 UBE2D2P62837 147 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
VRK3-202ENST00000377011 SPINK13Q1W4C9 94 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 LINC00467Q9BRT7 94 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
VRK3-202ENST00000377011 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 LEPROTO15243 131 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 CIDEAO60543 219 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 CFAP126Q5VTH2 177 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 RNF183Q96D59 192 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 ALMS1Q8TCU4 4167 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 A0A0J9YWU9 116 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 J3QQQ9 107 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 APOMO95445 188 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 SH2D6Q7Z4S9 175 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
VRK3-202ENST00000377011 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 A8MWV9 139 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 DEFB4AO15263 64 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 TSPAN13O95857 204 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
VRK3-202ENST00000377011 APOC4P55056 127 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 FOXI1Q12951 378 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 KIR2DL5BQ8NHK3 375 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 AMELXQ99217 191 aa8.84□□□□□ -0.99
VRK3-202ENST00000377011 M0QXV9 152 aa8.83□□□□□ -1
VRK3-202ENST00000377011 IGKV3-20P01619 116 aa8.83□□□□□ -1
VRK3-202ENST00000377011 IGHV3-30P01768 117 aa8.83□□□□□ -1
VRK3-202ENST00000377011 P0DMU3 169 aa8.83□□□□□ -1
VRK3-202ENST00000377011 FAM231AP0DMU4 169 aa8.83□□□□□ -1
VRK3-202ENST00000377011 FAM231CP0DMU5 169 aa8.83□□□□□ -1
VRK3-202ENST00000377011 IGHV3-30-5P0DP03 117 aa8.83□□□□□ -1
VRK3-202ENST00000377011 GTSF1LQ9H1H1 148 aa8.83□□□□□ -1
VRK3-202ENST00000377011 VPS13DQ5THJ4 4388 aa8.83□□□□□ -1
VRK3-202ENST00000377011 STHQ8IWL8 128 aa8.83□□□□□ -1
VRK3-202ENST00000377011 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
VRK3-202ENST00000377011 H3BMM0 161 aa8.82□□□□□ -1
VRK3-202ENST00000377011 C3orf84H3BNL1 204 aa8.82□□□□□ -1
VRK3-202ENST00000377011 M0R2P5 195 aa8.82□□□□□ -1
VRK3-202ENST00000377011 PSMB2P49721 201 aa8.82□□□□□ -1
VRK3-202ENST00000377011 TSPEAR-AS2P59090 65 aa8.82□□□□□ -1
VRK3-202ENST00000377011 ZNF415Q09FC8 603 aa8.82□□□□□ -1
VRK3-202ENST00000377011 C10orf126Q8N4M7 172 aa8.82□□□□□ -1
VRK3-202ENST00000377011 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
VRK3-202ENST00000377011 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
VRK3-202ENST00000377011 LOC107984156A0A0G2JMH3 177 aa8.81□□□□□ -1
VRK3-202ENST00000377011 RHODO00212 210 aa8.81□□□□□ -1
VRK3-202ENST00000377011 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
VRK3-202ENST00000377011 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
VRK3-202ENST00000377011 ARL17AQ8IVW1 177 aa8.81□□□□□ -1
VRK3-202ENST00000377011 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
VRK3-202ENST00000377011 A0A1B0GV72 72 aa8.8□□□□□ -1
VRK3-202ENST00000377011 CFC1BP0CG36 223 aa8.8□□□□□ -1
VRK3-202ENST00000377011 CFC1P0CG37 223 aa8.8□□□□□ -1
VRK3-202ENST00000377011 EMP1P54849 157 aa8.8□□□□□ -1
VRK3-202ENST00000377011 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
VRK3-202ENST00000377011 PPDPFLQ8WWR9 84 aa8.8□□□□□ -1
VRK3-202ENST00000377011 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
VRK3-202ENST00000377011 EPPK1P58107 5090 aaKnown RBP8.8□□□□□ -1
VRK3-202ENST00000377011 RBMY1A1P0DJD3 496 aaKnown RBP8.8□□□□□ -1
VRK3-202ENST00000377011 RBMY1CP0DJD4 496 aa8.8□□□□□ -1
VRK3-202ENST00000377011 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
VRK3-202ENST00000377011 RBMY1FQ15415 496 aaKnown RBP8.8□□□□□ -1
VRK3-202ENST00000377011 TEN1Q86WV5 123 aa8.8□□□□□ -1
VRK3-202ENST00000377011 SPXQ9BT56 116 aa8.8□□□□□ -1
VRK3-202ENST00000377011 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
VRK3-202ENST00000377011 XCL2Q9UBD3 114 aa8.8□□□□□ -1
VRK3-202ENST00000377011 X6R8D5 127 aa8.8□□□□□ -1
VRK3-202ENST00000377011 KMT2AQ03164 3969 aa8.79□□□□□ -1
VRK3-202ENST00000377011 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.79□□□□□ -1
VRK3-202ENST00000377011 A0A0B4J2C4 111 aa8.79□□□□□ -1
VRK3-202ENST00000377011 MRPS36P82909 103 aaKnown RBP8.79□□□□□ -1
VRK3-202ENST00000377011 MTURNQ8N3F0 131 aa8.79□□□□□ -1
VRK3-202ENST00000377011 IL17DQ8TAD2 202 aa8.79□□□□□ -1
VRK3-202ENST00000377011 PRM2P04554 102 aa8.78□□□□□ -1
VRK3-202ENST00000377011 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
VRK3-202ENST00000377011 Q8NAQ8 132 aa8.77□□□□□ -1
VRK3-202ENST00000377011 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1.01
VRK3-202ENST00000377011 TMEM262E9PQX1 116 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms