RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DAZ4Q86SG3 579 aaKnown RBP14.45□□□□□ -0.1
VSX1-202ENST00000376709 DAZ3Q9NR90 486 aaKnown RBP14.45□□□□□ -0.1
VSX1-202ENST00000376709 TINCRA0A1B0GVN0 87 aa14.44□□□□□ -0.1
VSX1-202ENST00000376709 CRLF1O75462 422 aa14.44□□□□□ -0.1
VSX1-202ENST00000376709 GAGE12JA6NER3 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30-3P0DP02 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE4Q13068 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE5Q13069 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE13Q4V321 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30P01768 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30-5P0DP03 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GEMIN7Q9H840 131 aaKnown RBP14.42□□□□□ -0.1
VSX1-202ENST00000376709 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
VSX1-202ENST00000376709 TRAV8-3A0A0A6YYJ7 113 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D1P51668 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D3P61077 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D2P62837 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 OVOL2Q9BRP0 275 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 PGPEP1Q9NXJ5 209 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 IGHV1-58A0A0C4DH39 117 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 K7ERU9 68 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 APOMO95445 188 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 SPATA3Q8NHX4 192 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 LINC00694P0DN24 101 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 NTM-AS1Q6ZSK4 140 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.39□□□□□ -0.11
VSX1-202ENST00000376709 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 C10orf126Q8N4M7 172 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 CIDEAO60543 219 aa14.38□□□□□ -0.11
VSX1-202ENST00000376709 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 TMEM238C9JI98 176 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 H3BMG7 143 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 VSIG2Q96IQ7 327 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 INSL3P51460 131 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 ATRQ13535 2644 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 A0A0J9YXY3 114 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 VPS25Q9BRG1 176 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 CDKN2A-AS1Q9UH64 79 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 CSDC2Q9Y534 153 aaKnown RBP14.36□□□□□ -0.11
VSX1-202ENST00000376709 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 TSPAN13O95857 204 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 SMAGPQ0VAQ4 97 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 C9orf66Q5T8R8 295 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 NDUFA12Q9UI09 145 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 UBE2L6O14933 153 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 SFTA2Q6UW10 78 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
VSX1-202ENST00000376709 CFC1BP0CG36 223 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 CFC1P0CG37 223 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 TIRAPP58753 221 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 SBSPONQ8IVN8 264 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 GTSF1LQ9H1H1 148 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 A8MZ25 164 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 MTURNQ8N3F0 131 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 TMEM243Q9BU79 118 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 HERVK_113P63121 156 aa14.33□□□□□ -0.12
VSX1-202ENST00000376709 RPL24P83731 157 aaKnown RBP14.33□□□□□ -0.12
VSX1-202ENST00000376709 IGLV5-45A0A087WSX0 123 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 DEFB130BP0DP73 79 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 DEFB130AP0DP74 79 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 F8P00451 2351 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 A4D1N5 150 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 FHL2Q14192 279 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 LINC00242Q5T6M2 205 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 MUSTN1Q8IVN3 82 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 CITED1Q99966 193 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 TRAV13-1A0A0B4J241 112 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 LOC107984156A0A0G2JMH3 177 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 COX6A2Q02221 97 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 WFDC2Q14508 124 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 ARL17AQ8IVW1 177 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 TMEM101Q96IK0 257 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 CDC42SE2Q9NRR3 84 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 F8W1H4 67 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 G3V4G9 280 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 ZFAND6Q6FIF0 208 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 PRO1854Q9UHT4 67 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 TEX48A0A1B0GUV7 120 aa14.29□□□□□ -0.12
VSX1-202ENST00000376709 TRRAPQ9Y4A5 3859 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 NBEAL2Q6ZNJ1 2754 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 KIR2DL5BQ8NHK3 375 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 LITAFQ99732 161 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 PRSS2P07478 247 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 PCP4P48539 62 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 PRO0461Q9UI25 63 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 FAM19A3Q7Z5A8 133 aa14.27□□□□□ -0.13
VSX1-202ENST00000376709 EIF4EBP3O60516 100 aaPredicted RBP14.26□□□□□ -0.13
VSX1-202ENST00000376709 LYRM7Q5U5X0 104 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 X6R8D5 127 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.26□□□□□ -0.13
VSX1-202ENST00000376709 H7C423 109 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 C21orf62-AS1Q17RA5 79 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 SMIM9A6NGZ8 99 aa14.25□□□□□ -0.13
VSX1-202ENST00000376709 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
VSX1-202ENST00000376709 PSMB2P49721 201 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 SPANXDQ9BXN6 97 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 SPANXCQ9NY87 97 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 TRBV6-8A0A0A6YYG3 113 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 A0A0B4J2C4 111 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms