RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DAZ4Q86SG3 579 aaKnown RBP14.45□□□□□ -0.1
VSX1-202ENST00000376709 DAZ3Q9NR90 486 aaKnown RBP14.45□□□□□ -0.1
VSX1-202ENST00000376709 TINCRA0A1B0GVN0 87 aa14.44□□□□□ -0.1
VSX1-202ENST00000376709 CRLF1O75462 422 aa14.44□□□□□ -0.1
VSX1-202ENST00000376709 GAGE12JA6NER3 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30-3P0DP02 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE4Q13068 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE5Q13069 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GAGE13Q4V321 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30P01768 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 IGHV3-30-5P0DP03 117 aa14.43□□□□□ -0.1
VSX1-202ENST00000376709 GEMIN7Q9H840 131 aaKnown RBP14.42□□□□□ -0.1
VSX1-202ENST00000376709 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
VSX1-202ENST00000376709 TRAV8-3A0A0A6YYJ7 113 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D1P51668 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D3P61077 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 UBE2D2P62837 147 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 OVOL2Q9BRP0 275 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 PGPEP1Q9NXJ5 209 aa14.41□□□□□ -0.1
VSX1-202ENST00000376709 IGHV1-58A0A0C4DH39 117 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 K7ERU9 68 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 APOMO95445 188 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 SPATA3Q8NHX4 192 aa14.4□□□□□ -0.1
VSX1-202ENST00000376709 LINC00694P0DN24 101 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 NTM-AS1Q6ZSK4 140 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.39□□□□□ -0.11
VSX1-202ENST00000376709 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 C10orf126Q8N4M7 172 aa14.39□□□□□ -0.11
VSX1-202ENST00000376709 CIDEAO60543 219 aa14.38□□□□□ -0.11
VSX1-202ENST00000376709 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 TMEM238C9JI98 176 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 H3BMG7 143 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 VSIG2Q96IQ7 327 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 INSL3P51460 131 aa14.37□□□□□ -0.11
VSX1-202ENST00000376709 ATRQ13535 2644 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 A0A0J9YXY3 114 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 VPS25Q9BRG1 176 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 CDKN2A-AS1Q9UH64 79 aa14.36□□□□□ -0.11
VSX1-202ENST00000376709 CSDC2Q9Y534 153 aaKnown RBP14.36□□□□□ -0.11
VSX1-202ENST00000376709 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 TSPAN13O95857 204 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 SMAGPQ0VAQ4 97 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 C9orf66Q5T8R8 295 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 NDUFA12Q9UI09 145 aa14.35□□□□□ -0.11
VSX1-202ENST00000376709 UBE2L6O14933 153 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 SFTA2Q6UW10 78 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
VSX1-202ENST00000376709 CFC1BP0CG36 223 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 CFC1P0CG37 223 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 TIRAPP58753 221 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 SBSPONQ8IVN8 264 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 GTSF1LQ9H1H1 148 aa14.34□□□□□ -0.11
VSX1-202ENST00000376709 A8MZ25 164 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 MTURNQ8N3F0 131 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 TMEM243Q9BU79 118 aa14.33□□□□□ -0.11
VSX1-202ENST00000376709 HERVK_113P63121 156 aa14.33□□□□□ -0.12
VSX1-202ENST00000376709 RPL24P83731 157 aaKnown RBP14.33□□□□□ -0.12
VSX1-202ENST00000376709 IGLV5-45A0A087WSX0 123 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 DEFB130BP0DP73 79 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 DEFB130AP0DP74 79 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 F8P00451 2351 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 A4D1N5 150 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 FHL2Q14192 279 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 LINC00242Q5T6M2 205 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 MUSTN1Q8IVN3 82 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 CITED1Q99966 193 aa14.32□□□□□ -0.12
VSX1-202ENST00000376709 TRAV13-1A0A0B4J241 112 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 LOC107984156A0A0G2JMH3 177 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 COX6A2Q02221 97 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 WFDC2Q14508 124 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 ARL17AQ8IVW1 177 aa14.31□□□□□ -0.12
VSX1-202ENST00000376709 TMEM101Q96IK0 257 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 CDC42SE2Q9NRR3 84 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 F8W1H4 67 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 G3V4G9 280 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 ZFAND6Q6FIF0 208 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 PRO1854Q9UHT4 67 aa14.3□□□□□ -0.12
VSX1-202ENST00000376709 TEX48A0A1B0GUV7 120 aa14.29□□□□□ -0.12
VSX1-202ENST00000376709 TRRAPQ9Y4A5 3859 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 NBEAL2Q6ZNJ1 2754 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 KIR2DL5BQ8NHK3 375 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 LITAFQ99732 161 aa14.28□□□□□ -0.12
VSX1-202ENST00000376709 PRSS2P07478 247 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 PCP4P48539 62 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 PRO0461Q9UI25 63 aa14.27□□□□□ -0.12
VSX1-202ENST00000376709 FAM19A3Q7Z5A8 133 aa14.27□□□□□ -0.13
VSX1-202ENST00000376709 EIF4EBP3O60516 100 aaPredicted RBP14.26□□□□□ -0.13
VSX1-202ENST00000376709 LYRM7Q5U5X0 104 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 X6R8D5 127 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.26□□□□□ -0.13
VSX1-202ENST00000376709 H7C423 109 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 C21orf62-AS1Q17RA5 79 aa14.26□□□□□ -0.13
VSX1-202ENST00000376709 SMIM9A6NGZ8 99 aa14.25□□□□□ -0.13
VSX1-202ENST00000376709 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
VSX1-202ENST00000376709 PSMB2P49721 201 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 SPANXDQ9BXN6 97 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 SPANXCQ9NY87 97 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 TRBV6-8A0A0A6YYG3 113 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 A0A0B4J2C4 111 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms