RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 LINC01600Q96MT4 127 aa8.41□□□□□ -1.06
TM9SF2-201ENST00000376387 PRORYQ9H606 182 aa8.41□□□□□ -1.06
TM9SF2-201ENST00000376387 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
TM9SF2-201ENST00000376387 HIVEP3Q5T1R4 2406 aa8.41□□□□□ -1.06
TM9SF2-201ENST00000376387 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
TM9SF2-201ENST00000376387 IGHG2P01859 326 aa8.4□□□□□ -1.06
TM9SF2-201ENST00000376387 KNCNA6PVL3 124 aa8.4□□□□□ -1.07
TM9SF2-201ENST00000376387 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.07
TM9SF2-201ENST00000376387 Q6Q795 121 aa8.4□□□□□ -1.07
TM9SF2-201ENST00000376387 IGHV1-58A0A0C4DH39 117 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 MIAQ16674 131 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 Q6ZSN1 163 aa8.39□□□□□ -1.07
TM9SF2-201ENST00000376387 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 SPANXDQ9BXN6 97 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 NACAE9PAV3 2078 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 IGLV1-40P01703 118 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 LST1O00453 97 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 AVPP01185 164 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 TMEM61Q8N0U2 210 aa8.38□□□□□ -1.07
TM9SF2-201ENST00000376387 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
TM9SF2-201ENST00000376387 TRGV11A0A075B6L2 103 aa8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 IGHV3-38A0A0C4DH36 116 aa8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 A6NDX4 124 aa8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 H3BT86 120 aa8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 C3orf22Q8N5N4 141 aa8.36□□□□□ -1.07
TM9SF2-201ENST00000376387 IGHV4-61A0A0C4DH41 118 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 H3BUA1 57 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 COX6CP09669 75 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 SPTBN4Q9H254 2564 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 K7EMT4 169 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 CFHR3Q02985 330 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
TM9SF2-201ENST00000376387 K7EQG2 157 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 CD164Q04900 197 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 C19orf84I3L1E1 186 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 DEFB121Q5J5C9 76 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
TM9SF2-201ENST00000376387 SNRPD3P62318 126 aaKnown RBP8.33□□□□□ -1.08
TM9SF2-201ENST00000376387 COX6A2Q02221 97 aa8.33□□□□□ -1.08
TM9SF2-201ENST00000376387 Q8N2B8 174 aa8.33□□□□□ -1.08
TM9SF2-201ENST00000376387 SPG11Q96JI7 2443 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 SYNJ2BPP57105 145 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 UBE2E2Q96LR5 201 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 CREBBPQ92793 2442 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 PAX4O43316 350 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 TRACP01848 142 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 S100A7L2Q5SY68 101 aa8.32□□□□□ -1.08
TM9SF2-201ENST00000376387 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 TRBV7-7A0A0K0K1E9 115 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 FAM240AA0A1B0GVK7 77 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 PSMB8P28062 276 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 UTP20O75691 2785 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 SS18Q15532 418 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 SOSTDC1Q6X4U4 206 aa8.31□□□□□ -1.08
TM9SF2-201ENST00000376387 APOC4P55056 127 aa8.3□□□□□ -1.08
TM9SF2-201ENST00000376387 LINC00308Q8TCZ7 52 aa8.3□□□□□ -1.08
TM9SF2-201ENST00000376387 RBMY1BA6NDE4 496 aaKnown RBP8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 RBMY1EA6NEQ0 496 aaKnown RBP8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 RBMY1DP0C7P1 496 aaKnown RBP8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 Q9H8V8 135 aa8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 PIEZO1Q92508 2521 aa8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 UQCRQO14949 82 aa8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 NDUFA1O15239 70 aa8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 ITPR1Q14643 2758 aa8.29□□□□□ -1.08
TM9SF2-201ENST00000376387 LY6DQ14210 128 aa8.28□□□□□ -1.08
TM9SF2-201ENST00000376387 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
TM9SF2-201ENST00000376387 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
TM9SF2-201ENST00000376387 FAM218AQ96MZ4 157 aa8.28□□□□□ -1.08
TM9SF2-201ENST00000376387 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 IGHV3OR16-12A0A075B7B8 117 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 TIMM17BO60830 172 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 DAZ2Q13117 558 aaKnown RBP8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 CACNA1AO00555 2505 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 NCOR2Q9Y618 2525 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
TM9SF2-201ENST00000376387 COX7A2LO14548 114 aa8.26□□□□□ -1.09
TM9SF2-201ENST00000376387 DEFB131AP59861 70 aa8.26□□□□□ -1.09
TM9SF2-201ENST00000376387 IGHV4-30-2A0A087WSY4 118 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms