RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SETXQ7Z333 2677 aaKnown RBP6.39□□□□□ -1.39
UBR4-201ENST00000375218 TRAV13-2A0A0B4J235 113 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 C16orf97H3BN30 126 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 PRSS1P07477 247 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
UBR4-201ENST00000375218 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
UBR4-201ENST00000375218 COL6A6A6NMZ7 2263 aa6.38□□□□□ -1.39
UBR4-201ENST00000375218 IGKV2D-26A0A0A0MRZ7 120 aa6.38□□□□□ -1.39
UBR4-201ENST00000375218 LINC01549A6NIU2 74 aa6.38□□□□□ -1.39
UBR4-201ENST00000375218 MRGPRG-AS1Q2M3A8 158 aa6.38□□□□□ -1.39
UBR4-201ENST00000375218 CR1P17927 2039 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 LHBP01229 141 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 CRPP02741 224 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 ZNF826PQ6ZT77 177 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 RMI2Q96E14 147 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 IBA57-AS1B1ANH7 110 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 RPL27AP46776 148 aaKnown RBP6.37□□□□□ -1.39
UBR4-201ENST00000375218 GDF5OSQ5U4N7 250 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 ZNRD1Q9P1U0 126 aa6.37□□□□□ -1.39
UBR4-201ENST00000375218 ANKHD1Q8IWZ3 2542 aaKnown RBP6.37□□□□□ -1.39
UBR4-201ENST00000375218 ABCA12Q86UK0 2595 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 TRBV7-1A0A0A6YYK4 115 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 IGHV3-72A0A0B4J1Y9 119 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 E7EQL1 145 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 C19orf84I3L1E1 186 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 ZNF414Q96IQ9 312 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 NAV3Q8IVL0 2385 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 PIGBOS1A0A0B4J2F0 54 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 A8MU10 97 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 Q8IYB0 196 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 PSENENQ9NZ42 101 aa6.36□□□□□ -1.39
UBR4-201ENST00000375218 LRRK2Q5S007 2527 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 RPL28P46779 137 aaKnown RBP6.35□□□□□ -1.39
UBR4-201ENST00000375218 C2orf82Q6UX34 121 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 NDUFC1O43677 76 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
UBR4-201ENST00000375218 KLF14Q8TD94 323 aaPredicted RBP6.35□□□□□ -1.39
UBR4-201ENST00000375218 SPTAN1Q13813 2472 aaKnown RBP6.35□□□□□ -1.39
UBR4-201ENST00000375218 TRGV3P03979 118 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 DNHD1Q96M86 4753 aa6.35□□□□□ -1.39
UBR4-201ENST00000375218 SPINK4O60575 86 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
UBR4-201ENST00000375218 EDDM3BP56851 147 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 LYZL2Q7Z4W2 148 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 DYNLRB2Q8TF09 96 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 FAM208BQ5VWN6 2430 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 A0A0B4J2C4 111 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 C19orf71A6NCJ1 209 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 TNCP24821 2201 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 IGHV7-81A0A0B4J1V7 117 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 IAPPP10997 89 aa6.34□□□□□ -1.39
UBR4-201ENST00000375218 SPANXN5Q5MJ07 72 aa6.34□□□□□ -1.4
UBR4-201ENST00000375218 Q8N7P7 452 aa6.34□□□□□ -1.4
UBR4-201ENST00000375218 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.4
UBR4-201ENST00000375218 UNC79Q9P2D8 2635 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 P0C879 139 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 SPTBN1Q01082 2364 aaKnown RBP6.33□□□□□ -1.4
UBR4-201ENST00000375218 Q8N6K4 173 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 PRSS3P2Q8NHM4 247 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 PRSS2P07478 247 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 SAA1P0DJI8 122 aaPredicted RBP6.33□□□□□ -1.4
UBR4-201ENST00000375218 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
UBR4-201ENST00000375218 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
UBR4-201ENST00000375218 Q1T7F1 81 aa6.32□□□□□ -1.4
UBR4-201ENST00000375218 PPYP01298 95 aa6.32□□□□□ -1.4
UBR4-201ENST00000375218 ZNF818PQ6ZRF7 136 aa6.32□□□□□ -1.4
UBR4-201ENST00000375218 UBE2D3P61077 147 aa6.32□□□□□ -1.4
UBR4-201ENST00000375218 UBE2D2P62837 147 aa6.32□□□□□ -1.4
UBR4-201ENST00000375218 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
UBR4-201ENST00000375218 SDIM1Q6ZPB5 146 aa6.31□□□□□ -1.4
UBR4-201ENST00000375218 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
UBR4-201ENST00000375218 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
UBR4-201ENST00000375218 IGHV4-4A0A075B6R2 117 aa6.31□□□□□ -1.4
UBR4-201ENST00000375218 E7EUB6 86 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 SPANXN1Q5VSR9 72 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 KLK15Q9H2R5 256 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 ANKRD17O75179 2603 aaKnown RBP6.3□□□□□ -1.4
UBR4-201ENST00000375218 TRBV25-1A0A075B6N4 114 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 DEFB108AA8MXU0 73 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 Q8N814 137 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 FXYD7P58549 80 aa6.3□□□□□ -1.4
UBR4-201ENST00000375218 LY6HO94772 140 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 IGHV3-13P01766 116 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 DEFB108BQ8NET1 73 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 SH2D1AO60880 128 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 NPPCP23582 126 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 DSCR9P59020 149 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 LRCOL1A6NCL2 159 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms