RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 UBE2D2P62837 147 aa12.79□□□□□ -0.36
PTPRU-202ENST00000373779 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
PTPRU-202ENST00000373779 H3BQ85 93 aa12.79□□□□□ -0.36
PTPRU-202ENST00000373779 PRM2P04554 102 aa12.78□□□□□ -0.36
PTPRU-202ENST00000373779 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
PTPRU-202ENST00000373779 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
PTPRU-202ENST00000373779 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
PTPRU-202ENST00000373779 J3QKU1 62 aa12.77□□□□□ -0.36
PTPRU-202ENST00000373779 RBM3P98179 157 aaKnown RBP12.77□□□□□ -0.37
PTPRU-202ENST00000373779 DEFB4AO15263 64 aa12.77□□□□□ -0.37
PTPRU-202ENST00000373779 DEFB135Q30KP9 77 aa12.77□□□□□ -0.37
PTPRU-202ENST00000373779 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
PTPRU-202ENST00000373779 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
PTPRU-202ENST00000373779 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
PTPRU-202ENST00000373779 TRBV6-4A0A1B0GX49 114 aa12.75□□□□□ -0.37
PTPRU-202ENST00000373779 C18orf65Q6ZTR6 163 aa12.75□□□□□ -0.37
PTPRU-202ENST00000373779 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
PTPRU-202ENST00000373779 LRRC75A-AS1Q8N1F1 130 aa12.75□□□□□ -0.37
PTPRU-202ENST00000373779 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 UQCRQO14949 82 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 SDIM1Q6ZPB5 146 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 A0A1W2PPR1 153 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 BRI3O95415 125 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 DIRC1Q969H9 104 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 RMI2Q96E14 147 aa12.74□□□□□ -0.37
PTPRU-202ENST00000373779 TLN1Q9Y490 2541 aaKnown RBP12.74□□□□□ -0.37
PTPRU-202ENST00000373779 KLK12Q9UKR0 248 aa12.73□□□□□ -0.37
PTPRU-202ENST00000373779 Q6ZSV7 163 aa12.73□□□□□ -0.37
PTPRU-202ENST00000373779 AVPP01185 164 aa12.73□□□□□ -0.37
PTPRU-202ENST00000373779 LINC00269Q8N2A0 174 aa12.73□□□□□ -0.37
PTPRU-202ENST00000373779 WNK1Q9H4A3 2382 aa12.73□□□□□ -0.37
PTPRU-202ENST00000373779 PCSK5Q92824 1860 aa12.72□□□□□ -0.37
PTPRU-202ENST00000373779 SLPIP03973 132 aa12.72□□□□□ -0.37
PTPRU-202ENST00000373779 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
PTPRU-202ENST00000373779 REG3AQ06141 175 aa12.7□□□□□ -0.38
PTPRU-202ENST00000373779 C3orf22Q8N5N4 141 aa12.7□□□□□ -0.38
PTPRU-202ENST00000373779 IMUPQ9GZP8 106 aa12.7□□□□□ -0.38
PTPRU-202ENST00000373779 IGF2RP11717 2491 aa12.69□□□□□ -0.38
PTPRU-202ENST00000373779 FUSP35637 526 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTPRU-202ENST00000373779 CHCHD10Q8WYQ3 142 aaPredicted RBP12.69□□□□□ -0.38
PTPRU-202ENST00000373779 SORL1Q92673 2214 aa12.69□□□□□ -0.38
PTPRU-202ENST00000373779 CHCHD7Q9BUK0 85 aa12.69□□□□□ -0.38
PTPRU-202ENST00000373779 PDE6GP18545 87 aa12.68□□□□□ -0.38
PTPRU-202ENST00000373779 AMELXQ99217 191 aa12.68□□□□□ -0.38
PTPRU-202ENST00000373779 ZNF580Q9UK33 172 aa12.68□□□□□ -0.38
PTPRU-202ENST00000373779 CCDC179H3BU77 68 aa12.68□□□□□ -0.38
PTPRU-202ENST00000373779 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
PTPRU-202ENST00000373779 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 LINC00242Q5T6M2 205 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 TRAV23DV6A0A075B6W5 121 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 NREPQ16612 68 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 ATRXP46100 2492 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 Q6Q795 121 aa12.67□□□□□ -0.38
PTPRU-202ENST00000373779 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 LOC100131303A0A0U1RQF7 123 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 ADAMTSL4-AS1Q5T5F5 129 aa12.66□□□□□ -0.38
PTPRU-202ENST00000373779 COX7BP24311 80 aa12.65□□□□□ -0.38
PTPRU-202ENST00000373779 FAM240AA0A1B0GVK7 77 aa12.65□□□□□ -0.38
PTPRU-202ENST00000373779 LYRM9A8MSI8 78 aa12.65□□□□□ -0.38
PTPRU-202ENST00000373779 TMEM258P61165 79 aa12.64□□□□□ -0.39
PTPRU-202ENST00000373779 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
PTPRU-202ENST00000373779 UBE2BP63146 152 aa12.64□□□□□ -0.39
PTPRU-202ENST00000373779 ATP5EP2Q5VTU8 51 aa12.64□□□□□ -0.39
PTPRU-202ENST00000373779 WFDC11Q8NEX6 87 aa12.63□□□□□ -0.39
PTPRU-202ENST00000373779 SMIM1B2RUZ4 78 aa12.63□□□□□ -0.39
PTPRU-202ENST00000373779 IGHV4-28A0A0C4DH34 117 aa12.62□□□□□ -0.39
PTPRU-202ENST00000373779 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
PTPRU-202ENST00000373779 NDUFA7O95182 113 aa12.62□□□□□ -0.39
PTPRU-202ENST00000373779 COX6A2Q02221 97 aa12.62□□□□□ -0.39
PTPRU-202ENST00000373779 WFDC10AQ9H1F0 79 aa12.61□□□□□ -0.39
PTPRU-202ENST00000373779 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
PTPRU-202ENST00000373779 PTPRBP23467 1997 aa12.61□□□□□ -0.39
PTPRU-202ENST00000373779 C2CD3Q4AC94 2353 aa12.6□□□□□ -0.39
PTPRU-202ENST00000373779 MRAPQ8TCY5 172 aa12.6□□□□□ -0.39
PTPRU-202ENST00000373779 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
PTPRU-202ENST00000373779 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
PTPRU-202ENST00000373779 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
PTPRU-202ENST00000373779 HIGD2BQ4VC39 106 aa12.59□□□□□ -0.39
PTPRU-202ENST00000373779 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
PTPRU-202ENST00000373779 M0QXV9 152 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 FAM19A4Q96LR4 140 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 BBC3Q96PG8 261 aaPredicted RBP12.58□□□□□ -0.4
PTPRU-202ENST00000373779 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 CCL18P55774 89 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 LINC00315P59091 139 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 Q6ZSN1 163 aa12.58□□□□□ -0.4
PTPRU-202ENST00000373779 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
PTPRU-202ENST00000373779 C20orf197Q8N268 126 aa12.57□□□□□ -0.4
PTPRU-202ENST00000373779 CD164L2Q6UWJ8 174 aa12.56□□□□□ -0.4
PTPRU-202ENST00000373779 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
PTPRU-202ENST00000373779 AGRNO00468 2067 aa12.55□□□□□ -0.4
PTPRU-202ENST00000373779 LINC01006Q8NI28 216 aa12.55□□□□□ -0.4
PTPRU-202ENST00000373779 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 PRO0461Q9UI25 63 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 SERP2Q8N6R1 65 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms