RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CDIP1Q9H305 208 aa14.24□□□□□ -0.13
LHX3-202ENST00000371748 IGHV3-30P01768 117 aa14.23□□□□□ -0.13
LHX3-202ENST00000371748 IGHV3-30-5P0DP03 117 aa14.23□□□□□ -0.13
LHX3-202ENST00000371748 TENM1Q9UKZ4 2725 aa14.23□□□□□ -0.13
LHX3-202ENST00000371748 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
LHX3-202ENST00000371748 AMELXQ99217 191 aa14.23□□□□□ -0.13
LHX3-202ENST00000371748 IGLV4-3A0A075B6K6 122 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 A0A1B0GV72 72 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 PLAC8L1A1L4L8 177 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 CFC1P0CG37 223 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 DNAJC30Q96LL9 226 aa14.22□□□□□ -0.13
LHX3-202ENST00000371748 CEMP1Q6PRD7 247 aaPredicted RBP14.22□□□□□ -0.13
LHX3-202ENST00000371748 TCL1BO95988 128 aa14.21□□□□□ -0.13
LHX3-202ENST00000371748 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.13
LHX3-202ENST00000371748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.21□□□□□ -0.13
LHX3-202ENST00000371748 C16orf74Q96GX8 76 aa14.21□□□□□ -0.13
LHX3-202ENST00000371748 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.13
LHX3-202ENST00000371748 DAZ2Q13117 558 aaKnown RBP14.19□□□□□ -0.14
LHX3-202ENST00000371748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.19□□□□□ -0.14
LHX3-202ENST00000371748 TRAV4A0A0B4J268 109 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 IGKV2-29A2NJV5 120 aaPredicted RBP14.19□□□□□ -0.14
LHX3-202ENST00000371748 LYRM7Q5U5X0 104 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 C10orf126Q8N4M7 172 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 FAM104AQ969W3 186 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 CARD19Q96LW7 228 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 VCX2Q9H322 139 aa14.19□□□□□ -0.14
LHX3-202ENST00000371748 J3QQQ9 107 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 GAGE7O76087 117 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 GAGE12FP0CL80 117 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 GAGE12GP0CL81 117 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 GAGE12IP0CL82 117 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 TEN1Q86WV5 123 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 PYGO1Q9Y3Y4 419 aa14.18□□□□□ -0.14
LHX3-202ENST00000371748 RNASE13Q5GAN3 156 aaKnown RBP14.17□□□□□ -0.14
LHX3-202ENST00000371748 SBSPONQ8IVN8 264 aa14.17□□□□□ -0.14
LHX3-202ENST00000371748 TRBV20-1A0A075B6N2 111 aa14.17□□□□□ -0.14
LHX3-202ENST00000371748 K7EQD1 137 aa14.17□□□□□ -0.14
LHX3-202ENST00000371748 CKS1BP61024 79 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 PPDPFLQ8WWR9 84 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 A0A0J9YXV3 536 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 C9orf66Q5T8R8 295 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 PRO1854Q9UHT4 67 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
LHX3-202ENST00000371748 TRGV2A0A075B6R0 118 aa14.15□□□□□ -0.14
LHX3-202ENST00000371748 ATRQ13535 2644 aa14.15□□□□□ -0.14
LHX3-202ENST00000371748 CITED1Q99966 193 aa14.15□□□□□ -0.14
LHX3-202ENST00000371748 MT-ATP8P03928 68 aa14.14□□□□□ -0.15
LHX3-202ENST00000371748 EIF4EBP3O60516 100 aaPredicted RBP14.14□□□□□ -0.15
LHX3-202ENST00000371748 LGALS3P17931 250 aaKnown RBP14.14□□□□□ -0.15
LHX3-202ENST00000371748 CRYBA4P53673 196 aa14.14□□□□□ -0.15
LHX3-202ENST00000371748 XGP55808 180 aa14.14□□□□□ -0.15
LHX3-202ENST00000371748 TEP1Q99973 2627 aaKnown RBP14.13□□□□□ -0.15
LHX3-202ENST00000371748 SPINK8P0C7L1 97 aa14.13□□□□□ -0.15
LHX3-202ENST00000371748 RPL36AP83881 106 aaKnown RBP14.13□□□□□ -0.15
LHX3-202ENST00000371748 Q6ZUT4 128 aa14.13□□□□□ -0.15
LHX3-202ENST00000371748 RPL36ALQ969Q0 106 aaKnown RBP14.13□□□□□ -0.15
LHX3-202ENST00000371748 OVOL2Q9BRP0 275 aa14.13□□□□□ -0.15
LHX3-202ENST00000371748 TRBV10-1A0A0K0K1A3 114 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 TMEM223A0PJW6 202 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 GAGE12JA6NER3 117 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 ZNF22P17026 224 aaPredicted RBP14.12□□□□□ -0.15
LHX3-202ENST00000371748 GAGE4Q13068 117 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 GAGE5Q13069 117 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 SPANXA1Q9NS26 97 aa14.12□□□□□ -0.15
LHX3-202ENST00000371748 A4D1N5 150 aa14.11□□□□□ -0.15
LHX3-202ENST00000371748 TRRAPQ9Y4A5 3859 aa14.11□□□□□ -0.15
LHX3-202ENST00000371748 SCGB1C2P0DMR2 95 aa14.11□□□□□ -0.15
LHX3-202ENST00000371748 F8P00451 2351 aa14.11□□□□□ -0.15
LHX3-202ENST00000371748 IGHV3-64A0A075B6Q5 118 aa14.1□□□□□ -0.15
LHX3-202ENST00000371748 LEPROTO15243 131 aa14.1□□□□□ -0.15
LHX3-202ENST00000371748 ANKRD29Q8N6D5 301 aa14.1□□□□□ -0.15
LHX3-202ENST00000371748 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
LHX3-202ENST00000371748 FLNBO75369 2602 aaKnown RBP14.08□□□□□ -0.15
LHX3-202ENST00000371748 LOC100131303A0A0U1RQF7 123 aa14.08□□□□□ -0.16
LHX3-202ENST00000371748 NTM-AS1Q6ZSK4 140 aa14.08□□□□□ -0.16
LHX3-202ENST00000371748 MRPS36P82909 103 aaKnown RBP14.08□□□□□ -0.16
LHX3-202ENST00000371748 DAZ4Q86SG3 579 aaKnown RBP14.07□□□□□ -0.16
LHX3-202ENST00000371748 GEMIN7Q9H840 131 aaKnown RBP14.07□□□□□ -0.16
LHX3-202ENST00000371748 DAZ3Q9NR90 486 aaKnown RBP14.07□□□□□ -0.16
LHX3-202ENST00000371748 TRGV4A0A0C4DH28 118 aa14.07□□□□□ -0.16
LHX3-202ENST00000371748 LINC00694P0DN24 101 aa14.06□□□□□ -0.16
LHX3-202ENST00000371748 MUSTN1Q8IVN3 82 aa14.06□□□□□ -0.16
LHX3-202ENST00000371748 A0A0B4J2C4 111 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 SLC25A20O43772 301 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 DGAT2L7PQ6IED9 249 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 DEFB130BP0DP73 79 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 DEFB130AP0DP74 79 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 X6R8D5 127 aa14.05□□□□□ -0.16
LHX3-202ENST00000371748 NBEAL2Q6ZNJ1 2754 aa14.04□□□□□ -0.16
LHX3-202ENST00000371748 TRBV6-4A0A1B0GX49 114 aa14.04□□□□□ -0.16
LHX3-202ENST00000371748 FHL2Q14192 279 aa14.04□□□□□ -0.16
LHX3-202ENST00000371748 ERG28Q9UKR5 140 aa14.04□□□□□ -0.16
LHX3-202ENST00000371748 TRAV26-1A0A087WT03 109 aa14.03□□□□□ -0.16
LHX3-202ENST00000371748 C9JAW5 83 aa14.03□□□□□ -0.16
LHX3-202ENST00000371748 M0QXV9 152 aa14.03□□□□□ -0.16
LHX3-202ENST00000371748 H7C2G1 150 aa14.03□□□□□ -0.16
LHX3-202ENST00000371748 TINCRA0A1B0GVN0 87 aa14.02□□□□□ -0.16
LHX3-202ENST00000371748 TIMM21Q9BVV7 248 aa14.02□□□□□ -0.16
LHX3-202ENST00000371748 TRAV8-3A0A0A6YYJ7 113 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms