RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SPATA25Q9BR10 227 aa3.9□□□□□ -1.79
SMNDC1-202ENST00000369603 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.79
SMNDC1-202ENST00000369603 SETD2Q9BYW2 2564 aaPredicted RBP3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 TCL1BO95988 128 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 TSHBP01222 138 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 MIFP14174 115 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 FN1P02751 2386 aaKnown RBP3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 FAM19A4Q96LR4 140 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 MTORP42345 2549 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 COX7A2LO14548 114 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 TIRAPP58753 221 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 C9orf153Q5TBE3 101 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 FAM222AQ5U5X8 452 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 C5orf38Q86SI9 138 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 MUSTN1Q8IVN3 82 aa3.89□□□□□ -1.79
SMNDC1-202ENST00000369603 FASNP49327 2511 aaKnown RBP3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 ZNF22P17026 224 aaPredicted RBP3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 CXCL5P42830 114 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 CEMP1Q6PRD7 247 aaPredicted RBP3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 JMJD1CQ15652 2540 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 IGIPA6NJ69 53 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 PROK1P58294 105 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 MRPS36P82909 103 aaKnown RBP3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 CLPSL2Q6UWE3 100 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 SZT2Q5T011 3432 aa3.88□□□□□ -1.79
SMNDC1-202ENST00000369603 IGLV2-18A0A075B6J9 118 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 BEAN1Q3B7T3 259 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 SMR3AQ99954 134 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 ESM1Q9NQ30 184 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 A0A096LNT2 108 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 XGP55808 180 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 DEFB4AO15263 64 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 INAFM2P0DMQ5 153 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 HIST2H2BDQ6DRA6 164 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 EDA2RQ9HAV5 297 aa3.87□□□□□ -1.79
SMNDC1-202ENST00000369603 LINC01546A6NGU7 62 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 PSCAO43653 123 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 FHL3Q13643 280 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 WFDC10AQ9H1F0 79 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 A0A0J9YXY3 114 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 MIAQ16674 131 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 C1orf158Q8N1D5 194 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 CCL18P55774 89 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 UBE2D3P61077 147 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 UBE2D2P62837 147 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 LINC00482Q8N8I6 264 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 KIF25-AS1Q9Y6Z4 181 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 ACANP16112 2415 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
SMNDC1-202ENST00000369603 TRBV10-2A0A0K0K1G8 114 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 H0YGX0 51 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 NDUFA1O15239 70 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 TIMM17BO60830 172 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 PRM2P04554 102 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 MGAQ8IWI9 3026 aa3.85□□□□□ -1.79
SMNDC1-202ENST00000369603 IGLV10-54A0A075B6I4 117 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 IGHV4-28A0A0C4DH34 117 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 TEX49A0A1B0GTD5 131 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 MRAPQ8TCY5 172 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 CLEC2BQ92478 149 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 FAM236AA0A1B0GUQ0 79 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 FAM236BA0A1B0GV22 79 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 POM121L12Q8N7R1 296 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 IGHV3-30P01768 117 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 IGHV3-33P01772 117 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 IGHV3-30-5P0DP03 117 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 KLK12Q9UKR0 248 aa3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 CSDC2Q9Y534 153 aaKnown RBP3.84□□□□□ -1.79
SMNDC1-202ENST00000369603 UBE2D1P51668 147 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 REG3AQ06141 175 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 SPAG11BQ08648 103 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 DAND5Q8N907 189 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 CAMK2N2Q96S95 79 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 LAMTOR3Q9UHA4 124 aa3.84□□□□□ -1.8
SMNDC1-202ENST00000369603 TNRC18O15417 2968 aaPredicted RBP3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 H3BT86 120 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00315P59091 139 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms