RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
CHD1L-202ENST00000369258 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 TNFRSF18Q9Y5U5 241 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 NHLRC4P0CG21 123 aaPredicted RBP9.42□□□□□ -0.9
CHD1L-202ENST00000369258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
CHD1L-202ENST00000369258 C15orf53Q8NAA6 179 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 PSMB8P28062 276 aa9.41□□□□□ -0.9
CHD1L-202ENST00000369258 IGHV3-53P01767 116 aa9.41□□□□□ -0.9
CHD1L-202ENST00000369258 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
CHD1L-202ENST00000369258 IFITM1P13164 125 aa9.4□□□□□ -0.9
CHD1L-202ENST00000369258 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
CHD1L-202ENST00000369258 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
CHD1L-202ENST00000369258 H7C423 109 aa9.4□□□□□ -0.9
CHD1L-202ENST00000369258 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
CHD1L-202ENST00000369258 MIAQ16674 131 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 VSIG2Q96IQ7 327 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 H3BT86 120 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE7O76087 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE12FP0CL80 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE12GP0CL81 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE12IP0CL82 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 GAGE4Q13068 117 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
CHD1L-202ENST00000369258 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
CHD1L-202ENST00000369258 COX6A2Q02221 97 aa9.37□□□□□ -0.91
CHD1L-202ENST00000369258 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
CHD1L-202ENST00000369258 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
CHD1L-202ENST00000369258 Q6Q795 121 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 CCDC179H3BU77 68 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 PRB1P04280 392 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 PLA2G2AP14555 144 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
CHD1L-202ENST00000369258 LST1O00453 97 aa9.35□□□□□ -0.91
CHD1L-202ENST00000369258 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
CHD1L-202ENST00000369258 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
CHD1L-202ENST00000369258 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
CHD1L-202ENST00000369258 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
CHD1L-202ENST00000369258 LINC01587Q99440 93 aa9.34□□□□□ -0.91
CHD1L-202ENST00000369258 EDA2RQ9HAV5 297 aa9.34□□□□□ -0.91
CHD1L-202ENST00000369258 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
CHD1L-202ENST00000369258 CIRBPQ14011 172 aaKnown RBP9.33□□□□□ -0.92
CHD1L-202ENST00000369258 Q8N2B8 174 aa9.33□□□□□ -0.92
CHD1L-202ENST00000369258 TRRAPQ9Y4A5 3859 aa9.32□□□□□ -0.92
CHD1L-202ENST00000369258 UBR5O95071 2799 aaPredicted RBP9.32□□□□□ -0.92
CHD1L-202ENST00000369258 TIMM17BO60830 172 aa9.32□□□□□ -0.92
CHD1L-202ENST00000369258 ZNF415Q09FC8 603 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 CR1P17927 2039 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 B4DSR2 109 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 KRTAP10-9P60411 292 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
CHD1L-202ENST00000369258 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 TENM4Q6N022 2769 aa9.31□□□□□ -0.92
CHD1L-202ENST00000369258 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 NDUFA1O15239 70 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 PDZD2O15018 2839 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 Q9H8V8 135 aa9.3□□□□□ -0.92
CHD1L-202ENST00000369258 RS1O15537 224 aa9.29□□□□□ -0.92
CHD1L-202ENST00000369258 CITED2Q99967 270 aaPredicted RBP9.29□□□□□ -0.92
CHD1L-202ENST00000369258 TIRAPP58753 221 aa9.29□□□□□ -0.92
CHD1L-202ENST00000369258 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
CHD1L-202ENST00000369258 PIK3CD-AS1Q5SR53 167 aa9.29□□□□□ -0.92
CHD1L-202ENST00000369258 LINC00308Q8TCZ7 52 aa9.28□□□□□ -0.92
CHD1L-202ENST00000369258 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
CHD1L-202ENST00000369258 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.92
CHD1L-202ENST00000369258 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.92
CHD1L-202ENST00000369258 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.93
CHD1L-202ENST00000369258 ZNF702PQ9H963 129 aa9.27□□□□□ -0.93
CHD1L-202ENST00000369258 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
CHD1L-202ENST00000369258 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
CHD1L-202ENST00000369258 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
CHD1L-202ENST00000369258 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
CHD1L-202ENST00000369258 Q6ZTI0 123 aa9.26□□□□□ -0.93
CHD1L-202ENST00000369258 COX7A2LO14548 114 aa9.25□□□□□ -0.93
CHD1L-202ENST00000369258 HERVK_113P63121 156 aa9.25□□□□□ -0.93
CHD1L-202ENST00000369258 Q9HAA7 133 aa9.25□□□□□ -0.93
CHD1L-202ENST00000369258 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
CHD1L-202ENST00000369258 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
CHD1L-202ENST00000369258 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 PRIMA1Q86XR5 153 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 SMIM20Q8N5G0 67 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 PKD1L1Q8TDX9 2849 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 HELZ2Q9BYK8 2649 aaKnown RBP9.24□□□□□ -0.93
CHD1L-202ENST00000369258 IGLV5-39A0A0G2JS06 123 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 DYNLRB2Q8TF09 96 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms