RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 SEC11CQ9BY50 192 aa13.71□□□□□ -0.21
PARP1-202ENST00000366792 RPL32P62910 135 aaKnown RBP13.7□□□□□ -0.22
PARP1-202ENST00000366792 CHCHD10Q8WYQ3 142 aaPredicted RBP13.7□□□□□ -0.22
PARP1-202ENST00000366792 hDV102S1A0JD36 115 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 PHOX2AO14813 284 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 SMAGPQ0VAQ4 97 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 TMEM136Q6ZRR5 245 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 PRELID3AQ96N28 172 aa13.69□□□□□ -0.22
PARP1-202ENST00000366792 TCAPO15273 167 aa13.68□□□□□ -0.22
PARP1-202ENST00000366792 ZNF664Q8N3J9 261 aa13.68□□□□□ -0.22
PARP1-202ENST00000366792 TMEM18Q96B42 140 aa13.68□□□□□ -0.22
PARP1-202ENST00000366792 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
PARP1-202ENST00000366792 CDC42SE2Q9NRR3 84 aa13.68□□□□□ -0.22
PARP1-202ENST00000366792 SMR3BP02814 79 aaPredicted RBP13.67□□□□□ -0.22
PARP1-202ENST00000366792 IMMP2LQ96T52 175 aa13.67□□□□□ -0.22
PARP1-202ENST00000366792 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
PARP1-202ENST00000366792 LINC00959A0A1B0GUT2 108 aa13.66□□□□□ -0.22
PARP1-202ENST00000366792 EPM2AB3EWF7 344 aa13.66□□□□□ -0.22
PARP1-202ENST00000366792 XCL1P47992 114 aa13.66□□□□□ -0.22
PARP1-202ENST00000366792 Q6ZSA8 131 aa13.66□□□□□ -0.22
PARP1-202ENST00000366792 SS18Q15532 418 aa13.65□□□□□ -0.22
PARP1-202ENST00000366792 CFAP161Q6P656 301 aa13.65□□□□□ -0.22
PARP1-202ENST00000366792 AP5S1Q9NUS5 200 aa13.65□□□□□ -0.22
PARP1-202ENST00000366792 CCL25O15444 150 aa13.64□□□□□ -0.23
PARP1-202ENST00000366792 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
PARP1-202ENST00000366792 RAB5AP20339 215 aa13.63□□□□□ -0.23
PARP1-202ENST00000366792 RNASE13Q5GAN3 156 aaKnown RBP13.63□□□□□ -0.23
PARP1-202ENST00000366792 C15orf56Q8N910 161 aa13.63□□□□□ -0.23
PARP1-202ENST00000366792 LAMTOR2Q9Y2Q5 125 aa13.63□□□□□ -0.23
PARP1-202ENST00000366792 LOC389332A0A1B0GUA5 103 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 RPL39P62891 51 aaKnown RBP13.62□□□□□ -0.23
PARP1-202ENST00000366792 FOXI1Q12951 378 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 Q5VSD8 79 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 MAP1LC3AQ9H492 121 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 PCLOQ9Y6V0 5065 aa13.62□□□□□ -0.23
PARP1-202ENST00000366792 S100PP25815 95 aa13.61□□□□□ -0.23
PARP1-202ENST00000366792 HIGD2BQ4VC39 106 aa13.61□□□□□ -0.23
PARP1-202ENST00000366792 Q6ZUT4 128 aa13.61□□□□□ -0.23
PARP1-202ENST00000366792 C9orf163Q8N9P6 203 aa13.61□□□□□ -0.23
PARP1-202ENST00000366792 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
PARP1-202ENST00000366792 CNBPP62633 177 aaKnown RBP13.6□□□□□ -0.23
PARP1-202ENST00000366792 C10orf91Q5T1B1 145 aa13.6□□□□□ -0.23
PARP1-202ENST00000366792 CARHSP1Q9Y2V2 147 aaKnown RBP13.6□□□□□ -0.23
PARP1-202ENST00000366792 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
PARP1-202ENST00000366792 SCXQ7RTU7 201 aa13.59□□□□□ -0.23
PARP1-202ENST00000366792 TRAV13-1A0A0B4J241 112 aa13.58□□□□□ -0.24
PARP1-202ENST00000366792 FAM229AH3BQW9 127 aa13.58□□□□□ -0.24
PARP1-202ENST00000366792 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
PARP1-202ENST00000366792 CHAC1Q9BUX1 264 aa13.58□□□□□ -0.24
PARP1-202ENST00000366792 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
PARP1-202ENST00000366792 PRSS47A8MTI9 375 aa13.57□□□□□ -0.24
PARP1-202ENST00000366792 C1orf196B1AJZ1 125 aa13.57□□□□□ -0.24
PARP1-202ENST00000366792 RHEBQ15382 184 aa13.57□□□□□ -0.24
PARP1-202ENST00000366792 RPS10P5Q9NQ39 176 aa13.57□□□□□ -0.24
PARP1-202ENST00000366792 ABCA13Q86UQ4 5058 aa13.56□□□□□ -0.24
PARP1-202ENST00000366792 SLPIP03973 132 aa13.56□□□□□ -0.24
PARP1-202ENST00000366792 Q8N8P6 123 aa13.56□□□□□ -0.24
PARP1-202ENST00000366792 GVQW2A0A096LPI5 108 aaPredicted RBP13.55□□□□□ -0.24
PARP1-202ENST00000366792 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
PARP1-202ENST00000366792 OPRPNQ99935 248 aaPredicted RBP13.55□□□□□ -0.24
PARP1-202ENST00000366792 IGHV3-64A0A075B6Q5 118 aa13.54□□□□□ -0.24
PARP1-202ENST00000366792 IGHV1-58A0A0C4DH39 117 aa13.54□□□□□ -0.24
PARP1-202ENST00000366792 CIRBP-AS1Q8TBR5 109 aa13.54□□□□□ -0.24
PARP1-202ENST00000366792 IFI27P40305 119 aaPredicted RBP13.53□□□□□ -0.24
PARP1-202ENST00000366792 MRPS36P82909 103 aaKnown RBP13.53□□□□□ -0.24
PARP1-202ENST00000366792 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
PARP1-202ENST00000366792 COX7A2LO14548 114 aa13.52□□□□□ -0.25
PARP1-202ENST00000366792 MALP21145 153 aa13.52□□□□□ -0.25
PARP1-202ENST00000366792 LINC00528Q8N1L1 170 aa13.52□□□□□ -0.25
PARP1-202ENST00000366792 FAM104AQ969W3 186 aa13.52□□□□□ -0.25
PARP1-202ENST00000366792 DNAH8Q96JB1 4490 aa13.51□□□□□ -0.25
PARP1-202ENST00000366792 APOC3P02656 99 aa13.51□□□□□ -0.25
PARP1-202ENST00000366792 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
PARP1-202ENST00000366792 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
PARP1-202ENST00000366792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.51□□□□□ -0.25
PARP1-202ENST00000366792 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
PARP1-202ENST00000366792 NDUFA5Q16718 116 aa13.5□□□□□ -0.25
PARP1-202ENST00000366792 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
PARP1-202ENST00000366792 LINC00526Q96FQ7 95 aa13.5□□□□□ -0.25
PARP1-202ENST00000366792 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
PARP1-202ENST00000366792 ZNF561-AS1K7EIQ3 104 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 INAFM2P0DMQ5 153 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 COX19Q49B96 90 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 C5orf38Q86SI9 138 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 PYGO1Q9Y3Y4 419 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 FAT1Q14517 4588 aa13.49□□□□□ -0.25
PARP1-202ENST00000366792 PANO1I0J062 215 aa13.48□□□□□ -0.25
PARP1-202ENST00000366792 K7EMI3 77 aa13.48□□□□□ -0.25
PARP1-202ENST00000366792 IGLV4-3A0A075B6K6 122 aa13.47□□□□□ -0.25
PARP1-202ENST00000366792 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
PARP1-202ENST00000366792 TMEM141Q96I45 108 aa13.47□□□□□ -0.25
PARP1-202ENST00000366792 SNAPINO95295 136 aa13.46□□□□□ -0.25
PARP1-202ENST00000366792 MT-ND6P03923 174 aa13.46□□□□□ -0.25
PARP1-202ENST00000366792 SVBPQ8N300 66 aa13.46□□□□□ -0.25
PARP1-202ENST00000366792 DPH3Q96FX2 82 aa13.46□□□□□ -0.25
PARP1-202ENST00000366792 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.25
PARP1-202ENST00000366792 APOMO95445 188 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms