RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 INAFM2P0DMQ5 153 aa12.87□□□□□ -0.35
APH1A-202ENST00000360244 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 COX7CP15954 63 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 KLRB1Q12918 225 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 VPS13CQ709C8 3753 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 GAGE2AQ6NT46 116 aa12.86□□□□□ -0.35
APH1A-202ENST00000360244 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
APH1A-202ENST00000360244 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
APH1A-202ENST00000360244 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
APH1A-202ENST00000360244 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
APH1A-202ENST00000360244 HIST1H4AP62805 103 aaKnown RBP12.83□□□□□ -0.36
APH1A-202ENST00000360244 Q9HAA7 133 aa12.83□□□□□ -0.36
APH1A-202ENST00000360244 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
APH1A-202ENST00000360244 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
APH1A-202ENST00000360244 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
APH1A-202ENST00000360244 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
APH1A-202ENST00000360244 MALP21145 153 aa12.83□□□□□ -0.36
APH1A-202ENST00000360244 FAM19A3Q7Z5A8 133 aa12.83□□□□□ -0.36
APH1A-202ENST00000360244 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
APH1A-202ENST00000360244 DEFB131AP59861 70 aa12.82□□□□□ -0.36
APH1A-202ENST00000360244 HIST2H2BCQ6DN03 193 aa12.82□□□□□ -0.36
APH1A-202ENST00000360244 HIST2H2BDQ6DRA6 164 aa12.82□□□□□ -0.36
APH1A-202ENST00000360244 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
APH1A-202ENST00000360244 A8MTW9 85 aa12.81□□□□□ -0.36
APH1A-202ENST00000360244 CRYGAP11844 174 aa12.81□□□□□ -0.36
APH1A-202ENST00000360244 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
APH1A-202ENST00000360244 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
APH1A-202ENST00000360244 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
APH1A-202ENST00000360244 A0A1B0GX51 115 aa12.8□□□□□ -0.36
APH1A-202ENST00000360244 J3KT08 172 aa12.8□□□□□ -0.36
APH1A-202ENST00000360244 ATOX1O00244 68 aa12.8□□□□□ -0.36
APH1A-202ENST00000360244 ATRXP46100 2492 aa12.8□□□□□ -0.36
APH1A-202ENST00000360244 HOXD3P31249 432 aaPredicted RBP12.79□□□□□ -0.36
APH1A-202ENST00000360244 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
APH1A-202ENST00000360244 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
APH1A-202ENST00000360244 F5H768 121 aa12.79□□□□□ -0.36
APH1A-202ENST00000360244 RS1O15537 224 aa12.79□□□□□ -0.36
APH1A-202ENST00000360244 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
APH1A-202ENST00000360244 PF4P02776 101 aa12.78□□□□□ -0.36
APH1A-202ENST00000360244 C10orf105Q8TEF2 133 aa12.77□□□□□ -0.37
APH1A-202ENST00000360244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■■□ 24
APH1A-202ENST00000360244 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 DNAL4O96015 105 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 AVPP01185 164 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 CRPP02741 224 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 MSMBP08118 114 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 C19orf84I3L1E1 186 aa12.76□□□□□ -0.37
APH1A-202ENST00000360244 CRYBG3Q68DQ2 2970 aa12.75□□□□□ -0.37
APH1A-202ENST00000360244 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
APH1A-202ENST00000360244 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
APH1A-202ENST00000360244 FAM19A5Q7Z5A7 132 aaPredicted RBP12.74□□□□□ -0.37
APH1A-202ENST00000360244 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
APH1A-202ENST00000360244 RPL18AQ02543 176 aaKnown RBP12.74□□□□□ -0.37
APH1A-202ENST00000360244 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
APH1A-202ENST00000360244 A0A087WYN8 130 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 C14orf132Q9NPU4 83 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 Q96MF0 132 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 CYSTM1Q9H1C7 97 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 CDC42SE2Q9NRR3 84 aa12.73□□□□□ -0.37
APH1A-202ENST00000360244 RPS28P62857 69 aaKnown RBP12.72□□□□□ -0.37
APH1A-202ENST00000360244 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
APH1A-202ENST00000360244 IGHV4-30-2A0A087WSY4 118 aa12.72□□□□□ -0.37
APH1A-202ENST00000360244 SND1-IT1Q9HBX3 110 aa12.71□□□□□ -0.37
APH1A-202ENST00000360244 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 UCNP55089 124 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 DEFB112Q30KQ8 113 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 Q6JHZ5 121 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 SMIM11BQ8TCY0 68 aa12.71□□□□□ -0.38
APH1A-202ENST00000360244 NBL1P41271 181 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 C5orf47Q569G3 176 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 OBSCN-AS1Q96MR7 158 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 LINC00846Q9NV44 126 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 INSP01308 110 aa12.7□□□□□ -0.38
APH1A-202ENST00000360244 SLURP1P55000 103 aa12.69□□□□□ -0.38
APH1A-202ENST00000360244 CREBBPQ92793 2442 aa12.69□□□□□ -0.38
APH1A-202ENST00000360244 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
APH1A-202ENST00000360244 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
APH1A-202ENST00000360244 CCL19Q99731 98 aa12.68□□□□□ -0.38
APH1A-202ENST00000360244 MAP6D1Q9H9H5 199 aa12.68□□□□□ -0.38
APH1A-202ENST00000360244 H0YGX0 51 aa12.67□□□□□ -0.38
APH1A-202ENST00000360244 SERP2Q8N6R1 65 aa12.67□□□□□ -0.38
APH1A-202ENST00000360244 IGF2RP11717 2491 aa12.67□□□□□ -0.38
APH1A-202ENST00000360244 A0A087WVE0 104 aa12.66□□□□□ -0.38
APH1A-202ENST00000360244 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
APH1A-202ENST00000360244 K7EQD1 137 aa12.66□□□□□ -0.38
APH1A-202ENST00000360244 COX7B2Q8TF08 81 aa12.66□□□□□ -0.38
APH1A-202ENST00000360244 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
APH1A-202ENST00000360244 TRGV1A0A0A0MS02 117 aa12.65□□□□□ -0.38
APH1A-202ENST00000360244 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
APH1A-202ENST00000360244 ATP5J2P56134 94 aa12.65□□□□□ -0.38
APH1A-202ENST00000360244 TMEM258P61165 79 aa12.65□□□□□ -0.38
APH1A-202ENST00000360244 CSPG4Q6UVK1 2322 aa12.65□□□□□ -0.38
APH1A-202ENST00000360244 B4DSR2 109 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms