RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 Q6ZUT4 128 aa13.03□□□□□ -0.32
PDLIM7-203ENST00000359895 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
PDLIM7-203ENST00000359895 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 GAGE12JA6NER3 117 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 GAGE4Q13068 117 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 GAGE5Q13069 117 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 GAGE13Q4V321 117 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 PRIMA1Q86XR5 153 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 OR5A1Q8NGJ0 315 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 CSDC2Q9Y534 153 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-203ENST00000359895 A0A1B0GWB2 263 aa13.01□□□□□ -0.33
PDLIM7-203ENST00000359895 A0A1W2PPM0 123 aa13.01□□□□□ -0.33
PDLIM7-203ENST00000359895 GAGE10A6NGK3 116 aa13.01□□□□□ -0.33
PDLIM7-203ENST00000359895 RNASE13Q5GAN3 156 aaKnown RBP13□□□□□ -0.33
PDLIM7-203ENST00000359895 SAMD5Q5TGI4 173 aa13□□□□□ -0.33
PDLIM7-203ENST00000359895 K7ERJ3 54 aa12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 FABP2P12104 132 aa12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 UBE2D1P51668 147 aa12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 TIRAPP58753 221 aa12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
PDLIM7-203ENST00000359895 H7C423 109 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 K7EP34 96 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 FHL2Q14192 279 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 LINC00612Q8N6U2 182 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 IGHV1-58A0A0C4DH39 117 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 IGHV3-30-3P0DP02 117 aa12.98□□□□□ -0.33
PDLIM7-203ENST00000359895 APOC4P55056 127 aa12.97□□□□□ -0.33
PDLIM7-203ENST00000359895 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
PDLIM7-203ENST00000359895 NAA38Q9BRA0 125 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-203ENST00000359895 TMEM243Q9BU79 118 aa12.97□□□□□ -0.33
PDLIM7-203ENST00000359895 X6R8D5 127 aa12.97□□□□□ -0.33
PDLIM7-203ENST00000359895 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
PDLIM7-203ENST00000359895 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
PDLIM7-203ENST00000359895 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
PDLIM7-203ENST00000359895 IGLV5-45A0A087WSX0 123 aa12.95□□□□□ -0.34
PDLIM7-203ENST00000359895 IGLL5B9A064 214 aa12.95□□□□□ -0.34
PDLIM7-203ENST00000359895 UBE2L6O14933 153 aa12.95□□□□□ -0.34
PDLIM7-203ENST00000359895 LINC00694P0DN24 101 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 HERVK_113P63121 156 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 SPCS1Q9Y6A9 102 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 WIPF1O43516 503 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 IGHV3-30P01768 117 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 IGHV3-30-5P0DP03 117 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 ATRQ13535 2644 aa12.94□□□□□ -0.34
PDLIM7-203ENST00000359895 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
PDLIM7-203ENST00000359895 DNHD1Q96M86 4753 aa12.93□□□□□ -0.34
PDLIM7-203ENST00000359895 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
PDLIM7-203ENST00000359895 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
PDLIM7-203ENST00000359895 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
PDLIM7-203ENST00000359895 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
PDLIM7-203ENST00000359895 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
PDLIM7-203ENST00000359895 FBN1P35555 2871 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-203ENST00000359895 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
PDLIM7-203ENST00000359895 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
PDLIM7-203ENST00000359895 C10orf126Q8N4M7 172 aa12.9□□□□□ -0.34
PDLIM7-203ENST00000359895 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
PDLIM7-203ENST00000359895 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
PDLIM7-203ENST00000359895 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.35
PDLIM7-203ENST00000359895 NDUFA12Q9UI09 145 aa12.9□□□□□ -0.35
PDLIM7-203ENST00000359895 ZFAND6Q6FIF0 208 aa12.89□□□□□ -0.35
PDLIM7-203ENST00000359895 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
PDLIM7-203ENST00000359895 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-203ENST00000359895 DEFB135Q30KP9 77 aa12.87□□□□□ -0.35
PDLIM7-203ENST00000359895 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
PDLIM7-203ENST00000359895 COX6A2Q02221 97 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 FAM222AQ5U5X8 452 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 APOMO95445 188 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 MDFIQ99750 246 aa12.86□□□□□ -0.35
PDLIM7-203ENST00000359895 TIMM17BO60830 172 aa12.85□□□□□ -0.35
PDLIM7-203ENST00000359895 MIFP14174 115 aa12.85□□□□□ -0.35
PDLIM7-203ENST00000359895 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
PDLIM7-203ENST00000359895 SPANXDQ9BXN6 97 aa12.85□□□□□ -0.35
PDLIM7-203ENST00000359895 SPANXCQ9NY87 97 aa12.85□□□□□ -0.35
PDLIM7-203ENST00000359895 NDUFA1O15239 70 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 CFC1BP0CG36 223 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 CFC1P0CG37 223 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 GYPEP15421 78 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 GAGE6Q13070 117 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
PDLIM7-203ENST00000359895 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-203ENST00000359895 MUSTN1Q8IVN3 82 aa12.83□□□□□ -0.36
PDLIM7-203ENST00000359895 LITAFQ99732 161 aa12.83□□□□□ -0.36
PDLIM7-203ENST00000359895 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
PDLIM7-203ENST00000359895 LYRM7Q5U5X0 104 aa12.82□□□□□ -0.36
PDLIM7-203ENST00000359895 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
PDLIM7-203ENST00000359895 A0A0B4J2C4 111 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 A4D1N5 150 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 SMIM1B2RUZ4 78 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 TSPAN13O95857 204 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms