RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CCDC179H3BU77 68 aa11.02□□□□□ -0.64
LMX1B-201ENST00000355497 RBX1P62877 108 aa11.02□□□□□ -0.64
LMX1B-201ENST00000355497 Q6ZVQ6 151 aa11.02□□□□□ -0.64
LMX1B-201ENST00000355497 COX7CP15954 63 aa11.02□□□□□ -0.65
LMX1B-201ENST00000355497 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
LMX1B-201ENST00000355497 ACACAQ13085 2346 aa11.02□□□□□ -0.65
LMX1B-201ENST00000355497 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
LMX1B-201ENST00000355497 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
LMX1B-201ENST00000355497 EIF4EBP1Q13541 118 aaPredicted RBP11.01□□□□□ -0.65
LMX1B-201ENST00000355497 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
LMX1B-201ENST00000355497 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
LMX1B-201ENST00000355497 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
LMX1B-201ENST00000355497 WFDC10AQ9H1F0 79 aa11.01□□□□□ -0.65
LMX1B-201ENST00000355497 WISP2O76076 250 aa11□□□□□ -0.65
LMX1B-201ENST00000355497 ANAPC1Q9H1A4 1944 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 C19orf84I3L1E1 186 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 COX17Q14061 63 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 UBE2D2P62837 147 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 EBI3Q14213 229 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 RPL37AP8A6NKH3 93 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 FSTL3O95633 263 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 Q6ZSV7 163 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 C22orf34Q6ZV56 151 aa10.99□□□□□ -0.65
LMX1B-201ENST00000355497 LINC00526Q96FQ7 95 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 INAFM1C9JVW0 142 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 ZNF73O43830 326 aaPredicted RBP10.98□□□□□ -0.65
LMX1B-201ENST00000355497 Q6JHZ5 121 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 Q6ZPA2 131 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 LELP1Q5T871 98 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 NRACQ8N912 160 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 PLAC8L1A1L4L8 177 aa10.98□□□□□ -0.65
LMX1B-201ENST00000355497 MRPS36P82909 103 aaKnown RBP10.98□□□□□ -0.65
LMX1B-201ENST00000355497 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
LMX1B-201ENST00000355497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
LMX1B-201ENST00000355497 PMAIP1Q13794 54 aa10.97□□□□□ -0.65
LMX1B-201ENST00000355497 SMIM26A0A096LP01 95 aa10.97□□□□□ -0.65
LMX1B-201ENST00000355497 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
LMX1B-201ENST00000355497 IGLV2-11P01706 119 aa10.96□□□□□ -0.65
LMX1B-201ENST00000355497 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.66
LMX1B-201ENST00000355497 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.66
LMX1B-201ENST00000355497 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.66
LMX1B-201ENST00000355497 MED13Q9UHV7 2174 aa10.96□□□□□ -0.66
LMX1B-201ENST00000355497 RNASE3P12724 160 aaKnown RBP10.95□□□□□ -0.66
LMX1B-201ENST00000355497 PRORYQ9H606 182 aa10.95□□□□□ -0.66
LMX1B-201ENST00000355497 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
LMX1B-201ENST00000355497 C10orf99Q6UWK7 81 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 M0R2N4 97 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 ESRGQ1W209 222 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 RETNQ9HD89 108 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
LMX1B-201ENST00000355497 YPEL4Q96NS1 127 aa10.93□□□□□ -0.66
LMX1B-201ENST00000355497 MUC7Q8TAX7 377 aa10.93□□□□□ -0.66
LMX1B-201ENST00000355497 PSMG3-AS1Q96PY0 264 aa10.93□□□□□ -0.66
LMX1B-201ENST00000355497 DENND4CQ5VZ89 1909 aa10.93□□□□□ -0.66
LMX1B-201ENST00000355497 XGP55808 180 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 Q6ZS46 218 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 Q8IZM0 81 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 ZNF702PQ9H963 129 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 GTF3C1Q12789 2109 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 PRR9Q5T870 116 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 Q6Q795 121 aa10.92□□□□□ -0.66
LMX1B-201ENST00000355497 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
LMX1B-201ENST00000355497 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
LMX1B-201ENST00000355497 SPTAN1Q13813 2472 aaKnown RBP10.91□□□□□ -0.66
LMX1B-201ENST00000355497 M0QXV9 152 aa10.91□□□□□ -0.66
LMX1B-201ENST00000355497 PLXNB3Q9ULL4 1909 aa10.9□□□□□ -0.66
LMX1B-201ENST00000355497 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
LMX1B-201ENST00000355497 X6R8D5 127 aa10.9□□□□□ -0.66
LMX1B-201ENST00000355497 KLLNB2CW77 178 aa10.9□□□□□ -0.66
LMX1B-201ENST00000355497 CACNA1GO43497 2377 aa10.9□□□□□ -0.66
LMX1B-201ENST00000355497 PRYO14603 147 aa10.9□□□□□ -0.67
LMX1B-201ENST00000355497 CRIP3Q6Q6R5 217 aa10.9□□□□□ -0.67
LMX1B-201ENST00000355497 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
LMX1B-201ENST00000355497 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
LMX1B-201ENST00000355497 TRAV7A0A075B6U4 112 aa10.89□□□□□ -0.67
LMX1B-201ENST00000355497 C11orf21Q9P2W6 132 aa10.89□□□□□ -0.67
LMX1B-201ENST00000355497 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
LMX1B-201ENST00000355497 NANOS2P60321 138 aaKnown RBP10.88□□□□□ -0.67
LMX1B-201ENST00000355497 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
LMX1B-201ENST00000355497 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
LMX1B-201ENST00000355497 COL4A3Q01955 1670 aa10.88□□□□□ -0.67
LMX1B-201ENST00000355497 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
LMX1B-201ENST00000355497 CYSRT1A8MQ03 144 aa10.87□□□□□ -0.67
LMX1B-201ENST00000355497 LINC00208Q96KT6 92 aa10.87□□□□□ -0.67
LMX1B-201ENST00000355497 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
LMX1B-201ENST00000355497 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
LMX1B-201ENST00000355497 LY6G6CO95867 125 aa10.86□□□□□ -0.67
LMX1B-201ENST00000355497 MRGPRG-AS1Q2M3A8 158 aa10.86□□□□□ -0.67
LMX1B-201ENST00000355497 Q8N6K4 173 aa10.86□□□□□ -0.67
LMX1B-201ENST00000355497 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
LMX1B-201ENST00000355497 ZGRF1Q86YA3 2104 aa10.85□□□□□ -0.67
LMX1B-201ENST00000355497 LY6G6DO95868 133 aa10.85□□□□□ -0.67
LMX1B-201ENST00000355497 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
LMX1B-201ENST00000355497 Q8N814 137 aa10.84□□□□□ -0.67
LMX1B-201ENST00000355497 IGHV6-1A0A0B4J1U7 121 aa10.83□□□□□ -0.68
LMX1B-201ENST00000355497 PRM2P04554 102 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms