RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 ZNF25P17030 456 aaPredicted RBP7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 RAB5BP61020 215 aa7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 COX19Q49B96 90 aa7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 C20orf203Q8NBC4 194 aa7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 HSPG2P98160 4391 aa7.5□□□□□ -1.21
SLC28A1-202ENST00000338602 IGLV4-60A0A075B6I1 120 aa7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 IGKV2-29A2NJV5 120 aaPredicted RBP7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 FGF6P10767 208 aa7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 NRACQ8N912 160 aa7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 DNAH5Q8TE73 4624 aa7.49□□□□□ -1.21
SLC28A1-202ENST00000338602 TSHBP01222 138 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 HLA-DQA1P01909 254 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 DGAT2L7PQ6IED9 249 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 OR5A1Q8NGJ0 315 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
SLC28A1-202ENST00000338602 D6R8Y8 96 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 TNFRSF6BO95407 300 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 MT-ND6P03923 174 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 ESDP10768 282 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
SLC28A1-202ENST00000338602 IGLV10-54A0A075B6I4 117 aa7.46□□□□□ -1.21
SLC28A1-202ENST00000338602 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.46□□□□□ -1.21
SLC28A1-202ENST00000338602 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.21
SLC28A1-202ENST00000338602 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.21
SLC28A1-202ENST00000338602 WFDC2Q14508 124 aa7.46□□□□□ -1.21
SLC28A1-202ENST00000338602 NDUFA6P56556 154 aa7.46□□□□□ -1.22
SLC28A1-202ENST00000338602 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
SLC28A1-202ENST00000338602 PRELID3AQ96N28 172 aa7.46□□□□□ -1.22
SLC28A1-202ENST00000338602 SMIM2Q9BVW6 85 aa7.46□□□□□ -1.22
SLC28A1-202ENST00000338602 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
SLC28A1-202ENST00000338602 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
SLC28A1-202ENST00000338602 KRTAP10-1P60331 282 aa7.45□□□□□ -1.22
SLC28A1-202ENST00000338602 NPYP01303 97 aa7.44□□□□□ -1.22
SLC28A1-202ENST00000338602 CFAP161Q6P656 301 aa7.44□□□□□ -1.22
SLC28A1-202ENST00000338602 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
SLC28A1-202ENST00000338602 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
SLC28A1-202ENST00000338602 GAGE12HA6NDE8 117 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 S100A6P06703 90 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 SNRPEP62304 92 aaKnown RBP7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 SS18Q15532 418 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 KRTAP26-1Q6PEX3 210 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 ALKBH7Q9BT30 221 aaPredicted RBP7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
SLC28A1-202ENST00000338602 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
SLC28A1-202ENST00000338602 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
SLC28A1-202ENST00000338602 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
SLC28A1-202ENST00000338602 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
SLC28A1-202ENST00000338602 LOC105371267A0A1B0GV96 52 aa7.41□□□□□ -1.22
SLC28A1-202ENST00000338602 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
SLC28A1-202ENST00000338602 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
SLC28A1-202ENST00000338602 CCL25O15444 150 aa7.41□□□□□ -1.22
SLC28A1-202ENST00000338602 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
SLC28A1-202ENST00000338602 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 PRSS1P07477 247 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 XCL1P47992 114 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 SPANXA1Q9NS26 97 aa7.4□□□□□ -1.22
SLC28A1-202ENST00000338602 K7EMI3 77 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 G0S2P27469 103 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 BAGE3Q86Y29 109 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 Q8N1X5 172 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 Q8N8P6 123 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 C18orf32Q8TCD1 76 aa7.39□□□□□ -1.23
SLC28A1-202ENST00000338602 NUPR1O60356 82 aa7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 IFI27P40305 119 aaPredicted RBP7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 XGP55808 180 aa7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
SLC28A1-202ENST00000338602 SERF1AO75920 110 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 FOXI1Q12951 378 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 CD164L2Q6UWJ8 174 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 HIST3H2BBQ8N257 126 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
SLC28A1-202ENST00000338602 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
SLC28A1-202ENST00000338602 MALP21145 153 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms