RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 IGLV10-54A0A075B6I4 117 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 J3KT08 172 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 LINC00482Q8N8I6 264 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 TSHBP01222 138 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 C2orf91Q6ZV80 131 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 TRBV6-4A0A1B0GX49 114 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
PRKDC-202ENST00000338368 MUC7Q8TAX7 377 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 GTSF1LQ9H1H1 148 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 NHLRC4P0CG21 123 aaPredicted RBP4.61□□□□□ -1.67
PRKDC-202ENST00000338368 DAND5Q8N907 189 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
PRKDC-202ENST00000338368 TINCRA0A1B0GVN0 87 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 TMEM223A0PJW6 202 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 PIK3CD-AS1Q5SR53 167 aa4.61□□□□□ -1.67
PRKDC-202ENST00000338368 A0A0J9YXY3 114 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 COX7B2Q8TF08 81 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 H7C423 109 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 C1orf43Q9BWL3 253 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 C1orf158Q8N1D5 194 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 RNASE8Q8TDE3 154 aaKnown RBP4.6□□□□□ -1.67
PRKDC-202ENST00000338368 RBMY1FQ15415 496 aaKnown RBP4.6□□□□□ -1.67
PRKDC-202ENST00000338368 LAMTOR3Q9UHA4 124 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 KLK9Q2XQG4 91 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 SPATA25Q9BR10 227 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 WFDC2Q14508 124 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 IGIPA6NJ69 53 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
PRKDC-202ENST00000338368 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
PRKDC-202ENST00000338368 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 IGLV1-51P01701 117 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 IGLV2-18A0A075B6J9 118 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 MRAPQ8TCY5 172 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 BPTFQ12830 3046 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 LINC01620Q4KN68 170 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 COX7A2LO14548 114 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 Q8N2B8 174 aa4.59□□□□□ -1.67
PRKDC-202ENST00000338368 LYRM9A8MSI8 78 aa4.59□□□□□ -1.68
PRKDC-202ENST00000338368 NDUFA7O95182 113 aa4.59□□□□□ -1.68
PRKDC-202ENST00000338368 MIR7-3HGQ8N6C7 128 aa4.59□□□□□ -1.68
PRKDC-202ENST00000338368 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.68
PRKDC-202ENST00000338368 UNC80Q8N2C7 3258 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 TRBV6-8A0A0A6YYG3 113 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 A8MZ25 164 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 TIRAPP58753 221 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 USP24Q9UPU5 2620 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 C16orf95Q9H693 158 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 CHD7Q9P2D1 2997 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 GAGE2AQ6NT46 116 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 KLK12Q9UKR0 248 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 IGKV2D-24A0A075B6R9 120 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 G3V4G9 280 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 IGHV3-30P01768 117 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 IGHV3-33P01772 117 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 IGHV3-30-5P0DP03 117 aa4.58□□□□□ -1.68
PRKDC-202ENST00000338368 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 ATOX1O00244 68 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 FSHBP01225 129 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 FAM19A4Q96LR4 140 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 A0A0B4J2C4 111 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 ATP5EP2Q5VTU8 51 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 LINC00315P59091 139 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 EPG5Q9HCE0 2579 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 Q9HAA7 133 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 LINC00269Q8N2A0 174 aa4.57□□□□□ -1.68
PRKDC-202ENST00000338368 PDE6GP18545 87 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.56□□□□□ -1.68
PRKDC-202ENST00000338368 CLUHP3Q96NS8 147 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 MIFP14174 115 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 FUSP35637 526 aaKnown RBP eCLIP4.56□□□□□ -1.68
PRKDC-202ENST00000338368 C9orf153Q5TBE3 101 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 TRACP01848 142 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 MIAQ16674 131 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 RNF183Q96D59 192 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 RBX1P62877 108 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 UBE2BP63146 152 aa4.56□□□□□ -1.68
PRKDC-202ENST00000338368 NDUFB1O75438 58 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 SPAG11BQ08648 103 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 IGHV4-28A0A0C4DH34 117 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 BAALC-AS2P0C853 105 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 REG3AQ06141 175 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 CAMK2N2Q96S95 79 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
PRKDC-202ENST00000338368 UBE2D3P61077 147 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 TMEM258P61165 79 aa4.55□□□□□ -1.68
PRKDC-202ENST00000338368 UBE2D2P62837 147 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms