RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 OTOGQ6ZRI0 2925 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 PRM2P04554 102 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 SNRPD3P62318 126 aaKnown RBP8.68□□□□□ -1.02
RBM39-202ENST00000338163 MRPS36P82909 103 aaKnown RBP8.68□□□□□ -1.02
RBM39-202ENST00000338163 WFDC11Q8NEX6 87 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 NACAE9PAV3 2078 aa8.68□□□□□ -1.02
RBM39-202ENST00000338163 LRRC75A-AS1Q8N1F1 130 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 IGHV3-38A0A0C4DH36 116 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 BRI3O95415 125 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 ZNF469Q96JG9 3925 aaPredicted RBP8.67□□□□□ -1.02
RBM39-202ENST00000338163 SPANXDQ9BXN6 97 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 SPANXCQ9NY87 97 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 ABCA2Q9BZC7 2435 aa8.67□□□□□ -1.02
RBM39-202ENST00000338163 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
RBM39-202ENST00000338163 AKAP9Q99996 3911 aa8.66□□□□□ -1.02
RBM39-202ENST00000338163 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
RBM39-202ENST00000338163 KRTAP1-3Q8IUG1 177 aa8.65□□□□□ -1.02
RBM39-202ENST00000338163 YAE1D1Q9NRH1 226 aa8.65□□□□□ -1.02
RBM39-202ENST00000338163 FAM240AA0A1B0GVK7 77 aa8.65□□□□□ -1.03
RBM39-202ENST00000338163 IGHG2P01859 326 aa8.65□□□□□ -1.03
RBM39-202ENST00000338163 FAM104AQ969W3 186 aa8.65□□□□□ -1.03
RBM39-202ENST00000338163 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.03
RBM39-202ENST00000338163 MRPL23Q16540 153 aaKnown RBP8.63□□□□□ -1.03
RBM39-202ENST00000338163 DGAT2L7PQ6IED9 249 aa8.63□□□□□ -1.03
RBM39-202ENST00000338163 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
RBM39-202ENST00000338163 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
RBM39-202ENST00000338163 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
RBM39-202ENST00000338163 A0A096LNT2 108 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 MSMBP08118 114 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
RBM39-202ENST00000338163 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 Q9H8V8 135 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 B4DSR2 109 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 SYNJ2BPP57105 145 aa8.62□□□□□ -1.03
RBM39-202ENST00000338163 CITED2Q99967 270 aaPredicted RBP8.62□□□□□ -1.03
RBM39-202ENST00000338163 H3BUA1 57 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 Q6ZSN1 163 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 MTORP42345 2549 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 RBMY1A1P0DJD3 496 aaKnown RBP8.61□□□□□ -1.03
RBM39-202ENST00000338163 RBMY1CP0DJD4 496 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
RBM39-202ENST00000338163 RBMY1FQ15415 496 aaKnown RBP8.61□□□□□ -1.03
RBM39-202ENST00000338163 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
RBM39-202ENST00000338163 Q8N2B8 174 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 LINC01587Q99440 93 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
RBM39-202ENST00000338163 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
RBM39-202ENST00000338163 MXRA5Q9NR99 2828 aa8.6□□□□□ -1.03
RBM39-202ENST00000338163 LINC01356Q8N9X3 169 aa8.6□□□□□ -1.03
RBM39-202ENST00000338163 K7EMT4 169 aa8.6□□□□□ -1.03
RBM39-202ENST00000338163 IGLV1-40P01703 118 aa8.6□□□□□ -1.03
RBM39-202ENST00000338163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.6□□□□□ -1.03
RBM39-202ENST00000338163 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
RBM39-202ENST00000338163 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 HIVEP1P15822 2718 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 MAST4O15021 2626 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 K7EQG2 157 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 RS1O15537 224 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 IGHV4-31P0DP07 118 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 DEFB121Q5J5C9 76 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
RBM39-202ENST00000338163 COX7A2LO14548 114 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 A6NDX4 124 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 NDUFA7O95182 113 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
RBM39-202ENST00000338163 COX6A2Q02221 97 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
RBM39-202ENST00000338163 NDUFA1O15239 70 aa8.57□□□□□ -1.04
RBM39-202ENST00000338163 ACYP1P07311 99 aa8.57□□□□□ -1.04
RBM39-202ENST00000338163 PRIMA1Q86XR5 153 aa8.57□□□□□ -1.04
RBM39-202ENST00000338163 Q9HAA7 133 aa8.57□□□□□ -1.04
RBM39-202ENST00000338163 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
RBM39-202ENST00000338163 AVPP01185 164 aa8.56□□□□□ -1.04
RBM39-202ENST00000338163 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
RBM39-202ENST00000338163 TIMM17BO60830 172 aa8.56□□□□□ -1.04
RBM39-202ENST00000338163 DEFB131AP59861 70 aa8.56□□□□□ -1.04
RBM39-202ENST00000338163 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
RBM39-202ENST00000338163 CR1P17927 2039 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 C3orf22Q8N5N4 141 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 HIVEP2P31629 2446 aa8.55□□□□□ -1.04
RBM39-202ENST00000338163 PSMB8P28062 276 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 TIRAPP58753 221 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 SMR3AQ99954 134 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms