RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 DNAH10OSP0CZ25 163 aa14.61□□□□□ -0.07
TPM1-204ENST00000334895 A0A087WX48 190 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 SIVA1O15304 175 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 IGHV3-30P01768 117 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 IGHV3-33P01772 117 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 IGHV3-30-3P0DP02 117 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 IGHV3-30-5P0DP03 117 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 RNASE13Q5GAN3 156 aaKnown RBP14.6□□□□□ -0.07
TPM1-204ENST00000334895 LINC01556Q5JQF7 62 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 OR5A1Q8NGJ0 315 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 CDC42SE2Q9NRR3 84 aa14.6□□□□□ -0.07
TPM1-204ENST00000334895 MRPS36P82909 103 aaKnown RBP14.59□□□□□ -0.07
TPM1-204ENST00000334895 DGAT2L7PQ6IED9 249 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 TMEM141Q96I45 108 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.59□□□□□ -0.07
TPM1-204ENST00000334895 ATP5LO75964 103 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 ZC2HC1BQ5TFG8 222 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 IFI27L1Q96BM0 104 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 TMEM101Q96IK0 257 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 Q9H8V8 135 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 HSPB8Q9UJY1 196 aa14.59□□□□□ -0.07
TPM1-204ENST00000334895 ZNF664Q8N3J9 261 aa14.58□□□□□ -0.08
TPM1-204ENST00000334895 BAALCQ8WXS3 180 aa14.58□□□□□ -0.08
TPM1-204ENST00000334895 ALMS1Q8TCU4 4167 aa14.57□□□□□ -0.08
TPM1-204ENST00000334895 NPSP0C0P6 89 aa14.57□□□□□ -0.08
TPM1-204ENST00000334895 LGALS9CQ6DKI2 356 aa14.56□□□□□ -0.08
TPM1-204ENST00000334895 AMELXQ99217 191 aa14.55□□□□□ -0.08
TPM1-204ENST00000334895 ANGP03950 147 aaKnown RBP14.55□□□□□ -0.08
TPM1-204ENST00000334895 RYR3Q15413 4870 aa14.54□□□□□ -0.08
TPM1-204ENST00000334895 Q6ZN92 141 aa14.54□□□□□ -0.08
TPM1-204ENST00000334895 KLK12Q9UKR0 248 aa14.54□□□□□ -0.08
TPM1-204ENST00000334895 LCE6AA0A183 80 aa14.53□□□□□ -0.08
TPM1-204ENST00000334895 C3orf79P0CE67 100 aa14.53□□□□□ -0.08
TPM1-204ENST00000334895 LINC00269Q8N2A0 174 aa14.53□□□□□ -0.08
TPM1-204ENST00000334895 LINC00476Q8WZB0 136 aa14.53□□□□□ -0.08
TPM1-204ENST00000334895 CLPSL2Q6UWE3 100 aa14.52□□□□□ -0.08
TPM1-204ENST00000334895 VCX2Q9H322 139 aa14.52□□□□□ -0.08
TPM1-204ENST00000334895 TEX43Q6ZNM6 134 aa14.52□□□□□ -0.09
TPM1-204ENST00000334895 SPATA12Q7Z6I5 190 aa14.52□□□□□ -0.09
TPM1-204ENST00000334895 MAP1LC3CQ9BXW4 147 aa14.52□□□□□ -0.09
TPM1-204ENST00000334895 KRTAP1-5Q9BYS1 174 aa14.52□□□□□ -0.09
TPM1-204ENST00000334895 CST9LQ9H4G1 147 aa14.52□□□□□ -0.09
TPM1-204ENST00000334895 SACSQ9NZJ4 4579 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 K7EP13 123 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 LY6G6CO95867 125 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 PRSS1P07477 247 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 PMVKQ15126 192 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 PAPPA-AS1Q5QFB9 102 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 PRR34Q9NV39 138 aa14.51□□□□□ -0.09
TPM1-204ENST00000334895 PRSS29PA6NIE9 313 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 H0Y8G0 127 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 SYS1-DBNDD2H3BUS1 97 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 KRTDAPP60985 99 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 REG3AQ06141 175 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 ENHOQ6UWT2 76 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 OR10D4PQ8NGN7 298 aa14.5□□□□□ -0.09
TPM1-204ENST00000334895 IGKV3OR2-268A0A0C4DH90 116 aa14.49□□□□□ -0.09
TPM1-204ENST00000334895 TRAV12-1A0A0B4J245 112 aa14.48□□□□□ -0.09
TPM1-204ENST00000334895 TRAV9-2A0A087WT02 112 aa14.48□□□□□ -0.09
TPM1-204ENST00000334895 UBE2WQ96B02 151 aa14.48□□□□□ -0.09
TPM1-204ENST00000334895 TRAV13-1A0A0B4J241 112 aa14.47□□□□□ -0.09
TPM1-204ENST00000334895 UBE2D1P51668 147 aa14.47□□□□□ -0.09
TPM1-204ENST00000334895 ODF1Q14990 250 aa14.47□□□□□ -0.09
TPM1-204ENST00000334895 C10orf126Q8N4M7 172 aa14.47□□□□□ -0.09
TPM1-204ENST00000334895 C2orf88Q9BSF0 95 aa14.47□□□□□ -0.09
TPM1-204ENST00000334895 LINC00959A0A1B0GUT2 108 aa14.46□□□□□ -0.09
TPM1-204ENST00000334895 IBA57-AS1B1ANH7 110 aa14.46□□□□□ -0.09
TPM1-204ENST00000334895 NBDYA0A0U1RRE5 68 aa14.45□□□□□ -0.1
TPM1-204ENST00000334895 PET117Q6UWS5 81 aa14.45□□□□□ -0.1
TPM1-204ENST00000334895 IGLV4-69A0A075B6H9 119 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 PMCHL2Q9BQD1 86 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 DNAH6Q9C0G6 4158 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 KMT2AQ03164 3969 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 HYDINQ4G0P3 5121 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 CRPP02741 224 aa14.44□□□□□ -0.1
TPM1-204ENST00000334895 MRPL35Q9NZE8 188 aaKnown RBP14.44□□□□□ -0.1
TPM1-204ENST00000334895 A0A0J9YXV3 536 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 LOC105371267A0A1B0GV96 52 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 TTC32Q5I0X7 151 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 LINC00242Q5T6M2 205 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 LINC01545Q5VT33 79 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 CHTOPQ9Y3Y2 248 aaKnown RBP14.43□□□□□ -0.1
TPM1-204ENST00000334895 RYR2Q92736 4967 aa14.43□□□□□ -0.1
TPM1-204ENST00000334895 IGLV10-54A0A075B6I4 117 aa14.42□□□□□ -0.1
TPM1-204ENST00000334895 FAM19A3Q7Z5A8 133 aa14.42□□□□□ -0.1
TPM1-204ENST00000334895 F8VRH5 84 aa14.41□□□□□ -0.1
TPM1-204ENST00000334895 MIAQ16674 131 aa14.41□□□□□ -0.1
TPM1-204ENST00000334895 IGLC3P0DOY3 106 aa14.41□□□□□ -0.1
TPM1-204ENST00000334895 COX6A2Q02221 97 aa14.41□□□□□ -0.1
TPM1-204ENST00000334895 Q9HAA7 133 aa14.41□□□□□ -0.1
TPM1-204ENST00000334895 M0R2N4 97 aa14.39□□□□□ -0.11
TPM1-204ENST00000334895 CCL25O15444 150 aa14.39□□□□□ -0.11
TPM1-204ENST00000334895 SS18Q15532 418 aa14.39□□□□□ -0.11
TPM1-204ENST00000334895 Q6ZR54 194 aa14.39□□□□□ -0.11
TPM1-204ENST00000334895 CHCHD10Q8WYQ3 142 aaPredicted RBP14.39□□□□□ -0.11
TPM1-204ENST00000334895 C11orf86A6NJI1 115 aa14.38□□□□□ -0.11
TPM1-204ENST00000334895 XCL1P47992 114 aa14.38□□□□□ -0.11
TPM1-204ENST00000334895 KRTAP26-1Q6PEX3 210 aa14.38□□□□□ -0.11
TPM1-204ENST00000334895 NFE4Q86UQ8 179 aa14.38□□□□□ -0.11
TPM1-204ENST00000334895 DNAH10Q8IVF4 4471 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms