RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
TSFM-201ENST00000323833 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
TSFM-201ENST00000323833 TMEM101Q96IK0 257 aa10.16□□□□□ -0.78
TSFM-201ENST00000323833 RYR1P21817 5038 aa10.16□□□□□ -0.78
TSFM-201ENST00000323833 HERC2O95714 4834 aa10.16□□□□□ -0.78
TSFM-201ENST00000323833 GCSHP23434 173 aa10.15□□□□□ -0.78
TSFM-201ENST00000323833 KRTAP10-1P60331 282 aa10.15□□□□□ -0.78
TSFM-201ENST00000323833 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
TSFM-201ENST00000323833 OR5A1Q8NGJ0 315 aa10.15□□□□□ -0.78
TSFM-201ENST00000323833 LOC389332A0A1B0GUA5 103 aa10.14□□□□□ -0.79
TSFM-201ENST00000323833 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
TSFM-201ENST00000323833 TCAPO15273 167 aa10.14□□□□□ -0.79
TSFM-201ENST00000323833 CDK2AP2O75956 126 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 NDUFA5Q16718 116 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 KIAA1644Q3SXP7 199 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 CDC42SE2Q9NRR3 84 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 LAMTOR2Q9Y2Q5 125 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
TSFM-201ENST00000323833 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
TSFM-201ENST00000323833 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
TSFM-201ENST00000323833 RPL39P62891 51 aaKnown RBP10.12□□□□□ -0.79
TSFM-201ENST00000323833 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
TSFM-201ENST00000323833 ZNF664Q8N3J9 261 aa10.12□□□□□ -0.79
TSFM-201ENST00000323833 MAP1LC3AQ9H492 121 aa10.12□□□□□ -0.79
TSFM-201ENST00000323833 APOBP04114 4563 aaKnown RBP10.12□□□□□ -0.79
TSFM-201ENST00000323833 SNAPINO95295 136 aa10.11□□□□□ -0.79
TSFM-201ENST00000323833 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
TSFM-201ENST00000323833 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
TSFM-201ENST00000323833 SVBPQ8N300 66 aa10.11□□□□□ -0.79
TSFM-201ENST00000323833 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
TSFM-201ENST00000323833 TMEM18Q96B42 140 aa10.11□□□□□ -0.79
TSFM-201ENST00000323833 GNB1LQ9BYB4 327 aa10.11□□□□□ -0.79
TSFM-201ENST00000323833 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 PRSS1P07477 247 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 RAB5AP20339 215 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 SMAGPQ0VAQ4 97 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
TSFM-201ENST00000323833 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
TSFM-201ENST00000323833 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
TSFM-201ENST00000323833 Q6ZUT4 128 aa10.09□□□□□ -0.79
TSFM-201ENST00000323833 Q8N8P6 123 aa10.09□□□□□ -0.79
TSFM-201ENST00000323833 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
TSFM-201ENST00000323833 HSPG2P98160 4391 aa10.08□□□□□ -0.8
TSFM-201ENST00000323833 CCL25O15444 150 aa10.08□□□□□ -0.8
TSFM-201ENST00000323833 OPRPNQ99935 248 aaPredicted RBP10.08□□□□□ -0.8
TSFM-201ENST00000323833 IFI27P40305 119 aaPredicted RBP10.07□□□□□ -0.8
TSFM-201ENST00000323833 XCL1P47992 114 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 FOXI1Q12951 378 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 SS18Q15532 418 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 COX19Q49B96 90 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
TSFM-201ENST00000323833 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
TSFM-201ENST00000323833 XGP55808 180 aa10.06□□□□□ -0.8
TSFM-201ENST00000323833 FAM30AQ9NZY2 134 aa10.06□□□□□ -0.8
TSFM-201ENST00000323833 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 MT-ND6P03923 174 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 HAMPP81172 84 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 C15orf56Q8N910 161 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
TSFM-201ENST00000323833 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
TSFM-201ENST00000323833 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
TSFM-201ENST00000323833 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
TSFM-201ENST00000323833 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
TSFM-201ENST00000323833 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
TSFM-201ENST00000323833 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
TSFM-201ENST00000323833 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
TSFM-201ENST00000323833 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
TSFM-201ENST00000323833 LCE2CQ5TA81 110 aa10.03□□□□□ -0.8
TSFM-201ENST00000323833 SLPIP03973 132 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 CD164L2Q6UWJ8 174 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 C2orf66Q6UXQ4 117 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 PYGO1Q9Y3Y4 419 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
TSFM-201ENST00000323833 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
TSFM-201ENST00000323833 K7EMI3 77 aa10.01□□□□□ -0.81
TSFM-201ENST00000323833 YPEL4Q96NS1 127 aa10.01□□□□□ -0.81
TSFM-201ENST00000323833 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
TSFM-201ENST00000323833 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
TSFM-201ENST00000323833 IFITM10A6NMD0 228 aa9.99□□□□□ -0.81
TSFM-201ENST00000323833 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
TSFM-201ENST00000323833 Q6ZSA8 131 aa9.99□□□□□ -0.81
TSFM-201ENST00000323833 CBLN2Q8IUK8 224 aa9.99□□□□□ -0.81
TSFM-201ENST00000323833 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
TSFM-201ENST00000323833 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
TSFM-201ENST00000323833 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
TSFM-201ENST00000323833 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
TSFM-201ENST00000323833 Q8N1X5 172 aa9.98□□□□□ -0.81
TSFM-201ENST00000323833 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
TSFM-201ENST00000323833 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
TSFM-201ENST00000323833 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
TSFM-201ENST00000323833 COX7A2LO14548 114 aa9.97□□□□□ -0.81
TSFM-201ENST00000323833 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
TSFM-201ENST00000323833 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms