RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
SHISA3-201ENST00000319234 A0A0B4J2C4 111 aa13.13□□□□□ -0.31
SHISA3-201ENST00000319234 RS1O15537 224 aa13.13□□□□□ -0.31
SHISA3-201ENST00000319234 SPATA25Q9BR10 227 aa13.13□□□□□ -0.31
SHISA3-201ENST00000319234 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
SHISA3-201ENST00000319234 C2CD3Q4AC94 2353 aa13.12□□□□□ -0.31
SHISA3-201ENST00000319234 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
SHISA3-201ENST00000319234 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
SHISA3-201ENST00000319234 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
SHISA3-201ENST00000319234 CHCHD7Q9BUK0 85 aa13.12□□□□□ -0.31
SHISA3-201ENST00000319234 TIMM21Q9BVV7 248 aa13.12□□□□□ -0.31
SHISA3-201ENST00000319234 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
SHISA3-201ENST00000319234 GAGE12HA6NDE8 117 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 IGHV3-30-3P0DP02 117 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 SCGB1A1P11684 91 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 MTURNQ8N3F0 131 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 SIGMAR1Q99720 223 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 A4D1N5 150 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 SMCPP49901 116 aaPredicted RBP13.11□□□□□ -0.31
SHISA3-201ENST00000319234 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
SHISA3-201ENST00000319234 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
SHISA3-201ENST00000319234 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
SHISA3-201ENST00000319234 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 IGHV1-58A0A0C4DH39 117 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 Q6ZSN1 163 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 TRGV1A0A0A0MS02 117 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 TCL1BO95988 128 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 FOXI1Q12951 378 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
SHISA3-201ENST00000319234 IGHV3-33P01772 117 aa13.08□□□□□ -0.32
SHISA3-201ENST00000319234 MUSTN1Q8IVN3 82 aa13.08□□□□□ -0.32
SHISA3-201ENST00000319234 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
SHISA3-201ENST00000319234 C16orf74Q96GX8 76 aa13.07□□□□□ -0.32
SHISA3-201ENST00000319234 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
SHISA3-201ENST00000319234 MAST4O15021 2626 aa13.07□□□□□ -0.32
SHISA3-201ENST00000319234 SCGB1C2P0DMR2 95 aa13.06□□□□□ -0.32
SHISA3-201ENST00000319234 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
SHISA3-201ENST00000319234 ERG28Q9UKR5 140 aa13.06□□□□□ -0.32
SHISA3-201ENST00000319234 M0QXV9 152 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 SPANXDQ9BXN6 97 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 SPANXCQ9NY87 97 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 Q6ZTI0 123 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 TEN1Q86WV5 123 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 LITAFQ99732 161 aa13.05□□□□□ -0.32
SHISA3-201ENST00000319234 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
SHISA3-201ENST00000319234 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
SHISA3-201ENST00000319234 NOP10Q9NPE3 64 aaKnown RBP13.04□□□□□ -0.32
SHISA3-201ENST00000319234 Q9UF83 564 aa13.04□□□□□ -0.32
SHISA3-201ENST00000319234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.03□□□□□ -0.32
SHISA3-201ENST00000319234 IGKV2-29A2NJV5 120 aaPredicted RBP13.03□□□□□ -0.32
SHISA3-201ENST00000319234 PPDPFLQ8WWR9 84 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 NDUFA12Q9UI09 145 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 TIRAPP58753 221 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 Q6ZUT4 128 aa13.03□□□□□ -0.32
SHISA3-201ENST00000319234 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.32
SHISA3-201ENST00000319234 OVOL2Q9BRP0 275 aa13.02□□□□□ -0.32
SHISA3-201ENST00000319234 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.32
SHISA3-201ENST00000319234 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
SHISA3-201ENST00000319234 TIMM17BO60830 172 aa13.01□□□□□ -0.33
SHISA3-201ENST00000319234 RNASE13Q5GAN3 156 aaKnown RBP13.01□□□□□ -0.33
SHISA3-201ENST00000319234 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
SHISA3-201ENST00000319234 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
SHISA3-201ENST00000319234 RNF183Q96D59 192 aa13.01□□□□□ -0.33
SHISA3-201ENST00000319234 MIAQ16674 131 aa13□□□□□ -0.33
SHISA3-201ENST00000319234 TRBV10-1A0A0K0K1A3 114 aa13□□□□□ -0.33
SHISA3-201ENST00000319234 IGHV3-38A0A0C4DH36 116 aa12.99□□□□□ -0.33
SHISA3-201ENST00000319234 TRBV30A0A0K0K1B3 111 aa12.99□□□□□ -0.33
SHISA3-201ENST00000319234 SPINK8P0C7L1 97 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 JMJD1CQ15652 2540 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 ATXN8Q156A1 80 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 Q1RN00 199 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 DGAT2L7PQ6IED9 249 aa12.98□□□□□ -0.33
SHISA3-201ENST00000319234 K7EQD1 137 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 CIDEAO60543 219 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 IFITM1P13164 125 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 FAM19A3Q7Z5A8 133 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 F8P00451 2351 aa12.97□□□□□ -0.33
SHISA3-201ENST00000319234 NIPBLQ6KC79 2804 aaeCLIP12.97□□□□□ -0.33
SHISA3-201ENST00000319234 SLC25A20O43772 301 aa12.96□□□□□ -0.33
SHISA3-201ENST00000319234 GAGE7O76087 117 aa12.96□□□□□ -0.33
SHISA3-201ENST00000319234 GAGE12FP0CL80 117 aa12.96□□□□□ -0.33
SHISA3-201ENST00000319234 GAGE12GP0CL81 117 aa12.96□□□□□ -0.33
SHISA3-201ENST00000319234 GAGE12IP0CL82 117 aa12.96□□□□□ -0.33
SHISA3-201ENST00000319234 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
SHISA3-201ENST00000319234 TRGV2A0A075B6R0 118 aa12.96□□□□□ -0.34
SHISA3-201ENST00000319234 NDUFA1O15239 70 aa12.96□□□□□ -0.34
SHISA3-201ENST00000319234 PRSS2P07478 247 aa12.96□□□□□ -0.34
SHISA3-201ENST00000319234 HERVK_113P63121 156 aa12.96□□□□□ -0.34
SHISA3-201ENST00000319234 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.34
SHISA3-201ENST00000319234 ADAMTSL4-AS1Q5T5F5 129 aa12.96□□□□□ -0.34
SHISA3-201ENST00000319234 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.34
SHISA3-201ENST00000319234 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms