RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 C5orf42Q9H799 3197 aa12.71□□□□□ -0.37
GABRB3-202ENST00000311550 ZMAT4Q9H898 229 aa12.71□□□□□ -0.37
GABRB3-202ENST00000311550 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
GABRB3-202ENST00000311550 CDK2AP2O75956 126 aa12.71□□□□□ -0.37
GABRB3-202ENST00000311550 LINC00308Q8TCZ7 52 aa12.71□□□□□ -0.37
GABRB3-202ENST00000311550 RMI2Q96E14 147 aa12.71□□□□□ -0.37
GABRB3-202ENST00000311550 C9orf85Q96MD7 179 aa12.71□□□□□ -0.38
GABRB3-202ENST00000311550 A0A1B0GX51 115 aa12.71□□□□□ -0.38
GABRB3-202ENST00000311550 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-202ENST00000311550 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
GABRB3-202ENST00000311550 RAI1Q7Z5J4 1906 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-202ENST00000311550 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
GABRB3-202ENST00000311550 hADV29S1A0JD25 119 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 NDUFA1O15239 70 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 SMIM20Q8N5G0 67 aa12.69□□□□□ -0.38
GABRB3-202ENST00000311550 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
GABRB3-202ENST00000311550 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
GABRB3-202ENST00000311550 IGHV4-28A0A0C4DH34 117 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 CXCL5P42830 114 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 RNF183Q96D59 192 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 INSL3P51460 131 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 UBE2BP63146 152 aa12.67□□□□□ -0.38
GABRB3-202ENST00000311550 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
GABRB3-202ENST00000311550 IGIPA6NJ69 53 aa12.66□□□□□ -0.38
GABRB3-202ENST00000311550 TIRAPP58753 221 aa12.65□□□□□ -0.38
GABRB3-202ENST00000311550 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
GABRB3-202ENST00000311550 TRBV30A0A0K0K1B3 111 aa12.65□□□□□ -0.38
GABRB3-202ENST00000311550 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
GABRB3-202ENST00000311550 LOC100131303A0A0U1RQF7 123 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 REG3AQ06141 175 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 JMJD7-PLA2G4BH0Y9G9 81 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 ATOX1O00244 68 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 SLPIP03973 132 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 CHD7Q9P2D1 2997 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 HIGD2BQ4VC39 106 aa12.64□□□□□ -0.39
GABRB3-202ENST00000311550 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
GABRB3-202ENST00000311550 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
GABRB3-202ENST00000311550 SPTBN4Q9H254 2564 aa12.63□□□□□ -0.39
GABRB3-202ENST00000311550 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
GABRB3-202ENST00000311550 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-202ENST00000311550 ADAMTS20P59510 1910 aa12.62□□□□□ -0.39
GABRB3-202ENST00000311550 DIRC1Q969H9 104 aa12.62□□□□□ -0.39
GABRB3-202ENST00000311550 RBM3P98179 157 aaKnown RBP12.62□□□□□ -0.39
GABRB3-202ENST00000311550 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
GABRB3-202ENST00000311550 COL4A2P08572 1712 aa12.61□□□□□ -0.39
GABRB3-202ENST00000311550 TMEM256-PLSCR3K7ERE1 68 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 NDUFV3P56181 108 aaKnown RBP12.6□□□□□ -0.39
GABRB3-202ENST00000311550 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 CCL18P55774 89 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 BPTFQ12830 3046 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
GABRB3-202ENST00000311550 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-202ENST00000311550 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
GABRB3-202ENST00000311550 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
GABRB3-202ENST00000311550 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
GABRB3-202ENST00000311550 LINC01006Q8NI28 216 aa12.58□□□□□ -0.4
GABRB3-202ENST00000311550 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
GABRB3-202ENST00000311550 BBC3Q96PG8 261 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-202ENST00000311550 UBE2D1P51668 147 aa12.58□□□□□ -0.4
GABRB3-202ENST00000311550 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 H7C423 109 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 NDUFA7O95182 113 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 SDIM1Q6ZPB5 146 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 HTTP42858 3142 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 CITED1Q99966 193 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 NREPQ16612 68 aa12.57□□□□□ -0.4
GABRB3-202ENST00000311550 MRPS36P82909 103 aaKnown RBP12.56□□□□□ -0.4
GABRB3-202ENST00000311550 CRIP2P52943 208 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-202ENST00000311550 INAFM1C9JVW0 142 aa12.56□□□□□ -0.4
GABRB3-202ENST00000311550 KRTAP10-9P60411 292 aa12.56□□□□□ -0.4
GABRB3-202ENST00000311550 JMJD1CQ15652 2540 aa12.55□□□□□ -0.4
GABRB3-202ENST00000311550 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
GABRB3-202ENST00000311550 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
GABRB3-202ENST00000311550 TIMM17BO60830 172 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 XGP55808 180 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 ODF3L2Q3SX64 289 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 XAGE1AQ9HD64 81 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 COX7BP24311 80 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 LINC00526Q96FQ7 95 aa12.54□□□□□ -0.4
GABRB3-202ENST00000311550 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
GABRB3-202ENST00000311550 LST1O00453 97 aa12.53□□□□□ -0.4
GABRB3-202ENST00000311550 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.41
GABRB3-202ENST00000311550 SPATA25Q9BR10 227 aa12.52□□□□□ -0.41
GABRB3-202ENST00000311550 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
GABRB3-202ENST00000311550 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
GABRB3-202ENST00000311550 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
GABRB3-202ENST00000311550 UBE2D3P61077 147 aa12.5□□□□□ -0.41
GABRB3-202ENST00000311550 UBE2D2P62837 147 aa12.5□□□□□ -0.41
GABRB3-202ENST00000311550 CDC42SE2Q9NRR3 84 aa12.5□□□□□ -0.41
GABRB3-202ENST00000311550 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
GABRB3-202ENST00000311550 CHCHD7Q9BUK0 85 aa12.48□□□□□ -0.41
GABRB3-202ENST00000311550 PRB2P02812 416 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-202ENST00000311550 C11orf45Q8TAV5 145 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 H3BQ85 93 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms