RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 COX7BP24311 80 aa7.87□□□□□ -1.15
SYNPO2-201ENST00000307142 H3BQ85 93 aa7.86□□□□□ -1.15
SYNPO2-201ENST00000307142 NHLRC4P0CG21 123 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-201ENST00000307142 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
SYNPO2-201ENST00000307142 A4D1N5 150 aa7.86□□□□□ -1.15
SYNPO2-201ENST00000307142 H0Y9J4 135 aa7.85□□□□□ -1.15
SYNPO2-201ENST00000307142 M0QY20 66 aa7.85□□□□□ -1.15
SYNPO2-201ENST00000307142 IGLV5-52A0A0A0MRZ9 124 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 CRIP1P50238 77 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 H3BMG7 143 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 Q6ZTC4 211 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 ANKRD29Q8N6D5 301 aa7.84□□□□□ -1.15
SYNPO2-201ENST00000307142 E9PLD3 99 aa7.84□□□□□ -1.16
SYNPO2-201ENST00000307142 UBE2V1Q13404 147 aa7.84□□□□□ -1.16
SYNPO2-201ENST00000307142 ODF3L2Q3SX64 289 aa7.84□□□□□ -1.16
SYNPO2-201ENST00000307142 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 IGLC6P0CF74 106 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 RBX1P62877 108 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 MRGPRG-AS1Q2M3A8 158 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 NPSP0C0P6 89 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 NREPQ16612 68 aa7.83□□□□□ -1.16
SYNPO2-201ENST00000307142 PRR9Q5T870 116 aa7.82□□□□□ -1.16
SYNPO2-201ENST00000307142 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
SYNPO2-201ENST00000307142 F8W1H4 67 aa7.82□□□□□ -1.16
SYNPO2-201ENST00000307142 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-201ENST00000307142 PPDPFLQ8WWR9 84 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 LOC107984640A0A0U1RRK4 108 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 IGLV2-8P01709 118 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 ODF1Q14990 250 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 KLLNB2CW77 178 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 FOXI1Q12951 378 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 C1orf134Q5TEV5 83 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
SYNPO2-201ENST00000307142 IGKV2-28A0A075B6P5 120 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 IGKV2D-28P01615 120 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 IGLV4-69A0A075B6H9 119 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 LINC00474Q9P2X8 69 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 NUPR1O60356 82 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 MLST8Q9BVC4 326 aa7.8□□□□□ -1.16
SYNPO2-201ENST00000307142 ANKRD17O75179 2603 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 CD164L2Q6UWJ8 174 aa7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 UBE2D3P61077 147 aa7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 CRIP2P52943 208 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 KRTAP24-1Q3LI83 254 aa7.79□□□□□ -1.16
SYNPO2-201ENST00000307142 HRCT1Q6UXD1 115 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 RBM3P98179 157 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 K7EP34 96 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 TTTY13Q9BZ97 58 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 JMJD1CQ15652 2540 aa7.78□□□□□ -1.16
SYNPO2-201ENST00000307142 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.16
SYNPO2-201ENST00000307142 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 CHD8Q9HCK8 2581 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 DLEU1O43261 78 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 FHL3Q13643 280 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 LINC00959A0A1B0GUT2 108 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 ETDBQ3ZM63 59 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 PCNTO95613 3336 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 FN1P02751 2386 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 IGLV2-11P01706 119 aa7.77□□□□□ -1.17
SYNPO2-201ENST00000307142 IGKV2D-26A0A0A0MRZ7 120 aa7.76□□□□□ -1.17
SYNPO2-201ENST00000307142 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-201ENST00000307142 ABCA12Q86UK0 2595 aa7.76□□□□□ -1.17
SYNPO2-201ENST00000307142 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
SYNPO2-201ENST00000307142 A0A0J9YXY3 114 aa7.76□□□□□ -1.17
SYNPO2-201ENST00000307142 RNF185Q96GF1 192 aa7.75□□□□□ -1.17
SYNPO2-201ENST00000307142 TSHBP01222 138 aa7.75□□□□□ -1.17
SYNPO2-201ENST00000307142 PCP4P48539 62 aa7.75□□□□□ -1.17
SYNPO2-201ENST00000307142 SPANXCQ9NY87 97 aa7.75□□□□□ -1.17
SYNPO2-201ENST00000307142 C5orf42Q9H799 3197 aa7.75□□□□□ -1.17
SYNPO2-201ENST00000307142 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 TLN2Q9Y4G6 2542 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 PIK3CD-AS1Q5SR53 167 aa7.74□□□□□ -1.17
SYNPO2-201ENST00000307142 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 FSHBP01225 129 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 ZNF580Q9UK33 172 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 UBE2D2P62837 147 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 C1orf158Q8N1D5 194 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 TRBV27A0A0K0K1C4 114 aa7.73□□□□□ -1.17
SYNPO2-201ENST00000307142 SPANXDQ9BXN6 97 aa7.72□□□□□ -1.17
SYNPO2-201ENST00000307142 A0A1B0GX51 115 aa7.72□□□□□ -1.17
SYNPO2-201ENST00000307142 FXYD2P54710 66 aa7.72□□□□□ -1.17
SYNPO2-201ENST00000307142 TDRG1Q3Y452 100 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms