RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
SNAPC4-201ENST00000298532 SLPIP03973 132 aa12.28□□□□□ -0.44
SNAPC4-201ENST00000298532 HCFC1P51610 2035 aa12.28□□□□□ -0.44
SNAPC4-201ENST00000298532 USP17L23D6RBM5 183 aa12.28□□□□□ -0.44
SNAPC4-201ENST00000298532 CHKB-CPT1BH3BT56 60 aa12.28□□□□□ -0.44
SNAPC4-201ENST00000298532 Q6ZS46 218 aa12.27□□□□□ -0.44
SNAPC4-201ENST00000298532 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.44
SNAPC4-201ENST00000298532 NDUFC2-KCTD14E9PQ53 114 aa12.27□□□□□ -0.45
SNAPC4-201ENST00000298532 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
SNAPC4-201ENST00000298532 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.45
SNAPC4-201ENST00000298532 IL17DQ8TAD2 202 aa12.27□□□□□ -0.45
SNAPC4-201ENST00000298532 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.45
SNAPC4-201ENST00000298532 GAS8-AS1O95177 125 aa12.26□□□□□ -0.45
SNAPC4-201ENST00000298532 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
SNAPC4-201ENST00000298532 TSHBP01222 138 aa12.25□□□□□ -0.45
SNAPC4-201ENST00000298532 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
SNAPC4-201ENST00000298532 Q6YL49 198 aa12.25□□□□□ -0.45
SNAPC4-201ENST00000298532 FAM240AA0A1B0GVK7 77 aa12.24□□□□□ -0.45
SNAPC4-201ENST00000298532 EP400Q96L91 3159 aa12.24□□□□□ -0.45
SNAPC4-201ENST00000298532 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
SNAPC4-201ENST00000298532 NUP210LQ5VU65 1888 aa12.23□□□□□ -0.45
SNAPC4-201ENST00000298532 A8MZ25 164 aa12.23□□□□□ -0.45
SNAPC4-201ENST00000298532 NDUFC1O43677 76 aa12.22□□□□□ -0.45
SNAPC4-201ENST00000298532 CSPG4Q6UVK1 2322 aa12.22□□□□□ -0.45
SNAPC4-201ENST00000298532 ATP5EP56381 51 aaPredicted RBP12.22□□□□□ -0.45
SNAPC4-201ENST00000298532 CCL18P55774 89 aa12.22□□□□□ -0.45
SNAPC4-201ENST00000298532 PRR9Q5T870 116 aa12.21□□□□□ -0.45
SNAPC4-201ENST00000298532 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
SNAPC4-201ENST00000298532 DEFB135Q30KP9 77 aa12.21□□□□□ -0.45
SNAPC4-201ENST00000298532 UBE2D1P51668 147 aa12.21□□□□□ -0.46
SNAPC4-201ENST00000298532 REG3AQ06141 175 aa12.21□□□□□ -0.46
SNAPC4-201ENST00000298532 TANC2Q9HCD6 1990 aa12.21□□□□□ -0.46
SNAPC4-201ENST00000298532 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
SNAPC4-201ENST00000298532 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
SNAPC4-201ENST00000298532 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
SNAPC4-201ENST00000298532 SORL1Q92673 2214 aa12.19□□□□□ -0.46
SNAPC4-201ENST00000298532 PROK1P58294 105 aa12.19□□□□□ -0.46
SNAPC4-201ENST00000298532 C6orf99Q4VX62 202 aa12.19□□□□□ -0.46
SNAPC4-201ENST00000298532 LY6G6DO95868 133 aa12.19□□□□□ -0.46
SNAPC4-201ENST00000298532 KLLNB2CW77 178 aa12.18□□□□□ -0.46
SNAPC4-201ENST00000298532 DEFB4AO15263 64 aa12.18□□□□□ -0.46
SNAPC4-201ENST00000298532 SVIPQ8NHG7 77 aa12.18□□□□□ -0.46
SNAPC4-201ENST00000298532 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
SNAPC4-201ENST00000298532 A0A0U1RQV1 116 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 UBE2AP49459 152 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 NAV3Q8IVL0 2385 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 Q8N6K4 173 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 ATG2AQ2TAZ0 1938 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 PTPN13Q12923 2485 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 CRYGDP07320 174 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 UBE2D3P61077 147 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 UBE2D2P62837 147 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 MRPS36P82909 103 aaKnown RBP12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 Q6JHZ5 121 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
SNAPC4-201ENST00000298532 SPTSSBQ8NFR3 76 aa12.16□□□□□ -0.46
SNAPC4-201ENST00000298532 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
SNAPC4-201ENST00000298532 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
SNAPC4-201ENST00000298532 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
SNAPC4-201ENST00000298532 KLK5Q9Y337 293 aaPredicted RBP12.15□□□□□ -0.46
SNAPC4-201ENST00000298532 IGF2RP11717 2491 aa12.15□□□□□ -0.46
SNAPC4-201ENST00000298532 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
SNAPC4-201ENST00000298532 H0Y9J4 135 aa12.15□□□□□ -0.47
SNAPC4-201ENST00000298532 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
SNAPC4-201ENST00000298532 V9GYY9 64 aa12.14□□□□□ -0.47
SNAPC4-201ENST00000298532 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
SNAPC4-201ENST00000298532 A0A096LNJ9 63 aa12.14□□□□□ -0.47
SNAPC4-201ENST00000298532 SMIM11BQ8TCY0 68 aa12.14□□□□□ -0.47
SNAPC4-201ENST00000298532 LRP4O75096 1905 aa12.12□□□□□ -0.47
SNAPC4-201ENST00000298532 SNURFQ9Y675 71 aa12.12□□□□□ -0.47
SNAPC4-201ENST00000298532 CCKP06307 115 aa12.12□□□□□ -0.47
SNAPC4-201ENST00000298532 F8W735 103 aaPredicted RBP12.12□□□□□ -0.47
SNAPC4-201ENST00000298532 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
SNAPC4-201ENST00000298532 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 LINC00526Q96FQ7 95 aa12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 M0QXV9 152 aa12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
SNAPC4-201ENST00000298532 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
SNAPC4-201ENST00000298532 HILS1P60008 231 aa12.1□□□□□ -0.47
SNAPC4-201ENST00000298532 Q6ZQY7 126 aa12.1□□□□□ -0.47
SNAPC4-201ENST00000298532 PSMG3-AS1Q96PY0 264 aa12.1□□□□□ -0.47
SNAPC4-201ENST00000298532 IGLV4-69A0A075B6H9 119 aa12.1□□□□□ -0.47
SNAPC4-201ENST00000298532 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
SNAPC4-201ENST00000298532 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
SNAPC4-201ENST00000298532 DSCAMO60469 2012 aa12.09□□□□□ -0.47
SNAPC4-201ENST00000298532 SMIM26A0A096LP01 95 aa12.07□□□□□ -0.48
SNAPC4-201ENST00000298532 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
SNAPC4-201ENST00000298532 SONP18583 2426 aaKnown RBP12.06□□□□□ -0.48
SNAPC4-201ENST00000298532 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
SNAPC4-201ENST00000298532 Q6ZSV7 163 aa12.06□□□□□ -0.48
SNAPC4-201ENST00000298532 HIGD2AQ9BW72 106 aa12.06□□□□□ -0.48
SNAPC4-201ENST00000298532 IGKV4-1P06312 121 aa12.05□□□□□ -0.48
SNAPC4-201ENST00000298532 CD164L2Q6UWJ8 174 aa12.05□□□□□ -0.48
SNAPC4-201ENST00000298532 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
SNAPC4-201ENST00000298532 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
SNAPC4-201ENST00000298532 B9D2Q9BPU9 175 aa12.04□□□□□ -0.48
SNAPC4-201ENST00000298532 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms