RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FAM236BA0A1B0GV22 79 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 NXPH4O95158 308 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 A0A096LNT2 108 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 PRM2P04554 102 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 COX6CP09669 75 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 HIVEP2P31629 2446 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 A0A0J9YXV3 536 aa11.44□□□□□ -0.58
UBAP1-201ENST00000297661 TRGV11A0A075B6L2 103 aa11.44□□□□□ -0.58
UBAP1-201ENST00000297661 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
UBAP1-201ENST00000297661 Q6ZSV7 163 aa11.44□□□□□ -0.58
UBAP1-201ENST00000297661 LITAFQ99732 161 aa11.44□□□□□ -0.58
UBAP1-201ENST00000297661 SETD2Q9BYW2 2564 aaPredicted RBP11.43□□□□□ -0.58
UBAP1-201ENST00000297661 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
UBAP1-201ENST00000297661 JMJD1CQ15652 2540 aa11.43□□□□□ -0.58
UBAP1-201ENST00000297661 IGHV3-73A0A0B4J1V6 119 aa11.43□□□□□ -0.58
UBAP1-201ENST00000297661 K7EMT4 169 aa11.43□□□□□ -0.58
UBAP1-201ENST00000297661 LST1O00453 97 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 DEFB136Q30KP8 78 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 DSCR9P59020 149 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 CEMP1Q6PRD7 247 aaPredicted RBP11.42□□□□□ -0.58
UBAP1-201ENST00000297661 SPXQ9BT56 116 aa11.42□□□□□ -0.58
UBAP1-201ENST00000297661 NPC2P61916 151 aa11.41□□□□□ -0.58
UBAP1-201ENST00000297661 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
UBAP1-201ENST00000297661 C18orf65Q6ZTR6 163 aa11.41□□□□□ -0.58
UBAP1-201ENST00000297661 NF1P21359 2839 aa11.41□□□□□ -0.58
UBAP1-201ENST00000297661 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
UBAP1-201ENST00000297661 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 FN1P02751 2386 aaKnown RBP11.4□□□□□ -0.58
UBAP1-201ENST00000297661 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 I3L3M4 83 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
UBAP1-201ENST00000297661 KNCNA6PVL3 124 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 K7EQG2 157 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 TIMM21Q9BVV7 248 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
UBAP1-201ENST00000297661 NSD1Q96L73 2696 aaPredicted RBP11.38□□□□□ -0.59
UBAP1-201ENST00000297661 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 M0QY20 66 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 HOXD3P31249 432 aaPredicted RBP11.38□□□□□ -0.59
UBAP1-201ENST00000297661 PROK1P58294 105 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 RHOHQ15669 191 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 C20orf203Q8NBC4 194 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 NDUFA7O95182 113 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
UBAP1-201ENST00000297661 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
UBAP1-201ENST00000297661 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
UBAP1-201ENST00000297661 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
UBAP1-201ENST00000297661 LINC01356Q8N9X3 169 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 WNK1Q9H4A3 2382 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 SLURP1P55000 103 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 MIAQ16674 131 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 Q9UF83 564 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
UBAP1-201ENST00000297661 LY6G6DO95868 133 aa11.36□□□□□ -0.59
UBAP1-201ENST00000297661 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
UBAP1-201ENST00000297661 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
UBAP1-201ENST00000297661 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
UBAP1-201ENST00000297661 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
UBAP1-201ENST00000297661 ACYP1P07311 99 aa11.35□□□□□ -0.59
UBAP1-201ENST00000297661 HERVK_113P63121 156 aa11.35□□□□□ -0.59
UBAP1-201ENST00000297661 UQCRQO14949 82 aa11.35□□□□□ -0.59
UBAP1-201ENST00000297661 RNASE13Q5GAN3 156 aaKnown RBP11.35□□□□□ -0.59
UBAP1-201ENST00000297661 KLK5Q9Y337 293 aaPredicted RBP11.34□□□□□ -0.59
UBAP1-201ENST00000297661 A8MZ25 164 aa11.34□□□□□ -0.59
UBAP1-201ENST00000297661 NACAE9PAV3 2078 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 IGHV1-58A0A0C4DH39 117 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 DEFB131AP59861 70 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 ZNF702PQ9H963 129 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 KHDC1LQ5JSQ8 128 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
UBAP1-201ENST00000297661 LINC00643Q86TS7 51 aa11.32□□□□□ -0.6
UBAP1-201ENST00000297661 CD28P10747 220 aa11.32□□□□□ -0.6
UBAP1-201ENST00000297661 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
UBAP1-201ENST00000297661 DAND5Q8N907 189 aa11.31□□□□□ -0.6
UBAP1-201ENST00000297661 INAFM1C9JVW0 142 aa11.31□□□□□ -0.6
UBAP1-201ENST00000297661 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
UBAP1-201ENST00000297661 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
UBAP1-201ENST00000297661 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
UBAP1-201ENST00000297661 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
UBAP1-201ENST00000297661 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
UBAP1-201ENST00000297661 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
UBAP1-201ENST00000297661 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
UBAP1-201ENST00000297661 J3KT08 172 aa11.29□□□□□ -0.6
UBAP1-201ENST00000297661 Q6ZSN1 163 aa11.29□□□□□ -0.6
UBAP1-201ENST00000297661 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
UBAP1-201ENST00000297661 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
UBAP1-201ENST00000297661 CITED2Q99967 270 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms