RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 Q8N814 137 aa13.11□□□□□ -0.31
TIMP4-201ENST00000287814 MAP1LC3AQ9H492 121 aa13.11□□□□□ -0.31
TIMP4-201ENST00000287814 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
TIMP4-201ENST00000287814 IGKV3OR2-268A0A0C4DH90 116 aa13.1□□□□□ -0.31
TIMP4-201ENST00000287814 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
TIMP4-201ENST00000287814 OR5A1Q8NGJ0 315 aa13.1□□□□□ -0.31
TIMP4-201ENST00000287814 YPEL4Q96NS1 127 aa13.1□□□□□ -0.31
TIMP4-201ENST00000287814 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
TIMP4-201ENST00000287814 LRP1BQ9NZR2 4599 aa13.09□□□□□ -0.31
TIMP4-201ENST00000287814 COX19Q49B96 90 aa13.09□□□□□ -0.31
TIMP4-201ENST00000287814 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
TIMP4-201ENST00000287814 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
TIMP4-201ENST00000287814 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
TIMP4-201ENST00000287814 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.31
TIMP4-201ENST00000287814 Q8N8P6 123 aa13.08□□□□□ -0.31
TIMP4-201ENST00000287814 KIAA1109Q2LD37 5005 aa13.07□□□□□ -0.32
TIMP4-201ENST00000287814 MT-ND6P03923 174 aa13.07□□□□□ -0.32
TIMP4-201ENST00000287814 RAB5AP20339 215 aa13.07□□□□□ -0.32
TIMP4-201ENST00000287814 FABP9Q0Z7S8 132 aa13.07□□□□□ -0.32
TIMP4-201ENST00000287814 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
TIMP4-201ENST00000287814 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
TIMP4-201ENST00000287814 CSDC2Q9Y534 153 aaKnown RBP13.07□□□□□ -0.32
TIMP4-201ENST00000287814 COLCA2A8K830 154 aa13.06□□□□□ -0.32
TIMP4-201ENST00000287814 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
TIMP4-201ENST00000287814 FAM104AQ969W3 186 aa13.06□□□□□ -0.32
TIMP4-201ENST00000287814 RNASE13Q5GAN3 156 aaKnown RBP13.05□□□□□ -0.32
TIMP4-201ENST00000287814 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
TIMP4-201ENST00000287814 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
TIMP4-201ENST00000287814 TIMM21Q9BVV7 248 aa13.05□□□□□ -0.32
TIMP4-201ENST00000287814 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
TIMP4-201ENST00000287814 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
TIMP4-201ENST00000287814 Q6ZUT4 128 aa13.04□□□□□ -0.32
TIMP4-201ENST00000287814 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
TIMP4-201ENST00000287814 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
TIMP4-201ENST00000287814 USP17L23D6RBM5 183 aa13.03□□□□□ -0.32
TIMP4-201ENST00000287814 CHCHD10Q8WYQ3 142 aaPredicted RBP13.03□□□□□ -0.32
TIMP4-201ENST00000287814 OPRPNQ99935 248 aaPredicted RBP13.03□□□□□ -0.32
TIMP4-201ENST00000287814 NXT2Q9NPJ8 142 aaKnown RBP13.03□□□□□ -0.32
TIMP4-201ENST00000287814 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.32
TIMP4-201ENST00000287814 NTN5Q8WTR8 489 aaPredicted RBP13.02□□□□□ -0.33
TIMP4-201ENST00000287814 IGLV5-52A0A0A0MRZ9 124 aa13.01□□□□□ -0.33
TIMP4-201ENST00000287814 SMAGPQ0VAQ4 97 aa13.01□□□□□ -0.33
TIMP4-201ENST00000287814 KRTAP10-1P60331 282 aa13□□□□□ -0.33
TIMP4-201ENST00000287814 SPANXA1Q9NS26 97 aa13□□□□□ -0.33
TIMP4-201ENST00000287814 K7EMI3 77 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 CCL25O15444 150 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 XCL1P47992 114 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 FOXI1Q12951 378 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 ORMDL2Q53FV1 153 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 C2orf66Q6UXQ4 117 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
TIMP4-201ENST00000287814 PRSS1P07477 247 aa12.98□□□□□ -0.33
TIMP4-201ENST00000287814 GCSHP23434 173 aa12.98□□□□□ -0.33
TIMP4-201ENST00000287814 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
TIMP4-201ENST00000287814 SS18Q15532 418 aa12.97□□□□□ -0.33
TIMP4-201ENST00000287814 PYGO1Q9Y3Y4 419 aa12.97□□□□□ -0.33
TIMP4-201ENST00000287814 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.33
TIMP4-201ENST00000287814 CYSLTR1Q9Y271 337 aa12.96□□□□□ -0.33
TIMP4-201ENST00000287814 TMA7Q9Y2S6 64 aaKnown RBP12.96□□□□□ -0.33
TIMP4-201ENST00000287814 IGLV4-3A0A075B6K6 122 aa12.96□□□□□ -0.34
TIMP4-201ENST00000287814 LINC01546A6NGU7 62 aa12.96□□□□□ -0.34
TIMP4-201ENST00000287814 LINC01620Q4KN68 170 aa12.96□□□□□ -0.34
TIMP4-201ENST00000287814 C14orf177Q52M58 125 aa12.96□□□□□ -0.34
TIMP4-201ENST00000287814 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
TIMP4-201ENST00000287814 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
TIMP4-201ENST00000287814 C18orf32Q8TCD1 76 aa12.95□□□□□ -0.34
TIMP4-201ENST00000287814 RYR1P21817 5038 aa12.94□□□□□ -0.34
TIMP4-201ENST00000287814 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
TIMP4-201ENST00000287814 URB1-AS1Q96HZ7 61 aa12.94□□□□□ -0.34
TIMP4-201ENST00000287814 IGIPA6NJ69 53 aa12.93□□□□□ -0.34
TIMP4-201ENST00000287814 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
TIMP4-201ENST00000287814 ZC2HC1BQ5TFG8 222 aa12.93□□□□□ -0.34
TIMP4-201ENST00000287814 HERC2O95714 4834 aa12.92□□□□□ -0.34
TIMP4-201ENST00000287814 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
TIMP4-201ENST00000287814 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
TIMP4-201ENST00000287814 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
TIMP4-201ENST00000287814 hDV102S1A0JD36 115 aa12.91□□□□□ -0.34
TIMP4-201ENST00000287814 SLPIP03973 132 aa12.91□□□□□ -0.34
TIMP4-201ENST00000287814 IFITM10A6NMD0 228 aa12.9□□□□□ -0.34
TIMP4-201ENST00000287814 CDK2AP2O75956 126 aa12.9□□□□□ -0.34
TIMP4-201ENST00000287814 HSPG2P98160 4391 aa12.9□□□□□ -0.34
TIMP4-201ENST00000287814 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
TIMP4-201ENST00000287814 LINC00173Q6ZV60 143 aa12.89□□□□□ -0.35
TIMP4-201ENST00000287814 FAM30AQ9NZY2 134 aa12.89□□□□□ -0.35
TIMP4-201ENST00000287814 CFAP161Q6P656 301 aa12.89□□□□□ -0.35
TIMP4-201ENST00000287814 TRGC2P03986 189 aa12.88□□□□□ -0.35
TIMP4-201ENST00000287814 LINC00614P0C842 121 aa12.88□□□□□ -0.35
TIMP4-201ENST00000287814 G0S2P27469 103 aa12.88□□□□□ -0.35
TIMP4-201ENST00000287814 C5orf38Q86SI9 138 aa12.88□□□□□ -0.35
TIMP4-201ENST00000287814 AMELXQ99217 191 aa12.88□□□□□ -0.35
TIMP4-201ENST00000287814 XGP55808 180 aa12.87□□□□□ -0.35
TIMP4-201ENST00000287814 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
TIMP4-201ENST00000287814 KRTAP17-1Q9BYP8 105 aa12.87□□□□□ -0.35
TIMP4-201ENST00000287814 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
TIMP4-201ENST00000287814 A0A096LNJ9 63 aa12.86□□□□□ -0.35
TIMP4-201ENST00000287814 ERASQ7Z444 233 aa12.86□□□□□ -0.35
TIMP4-201ENST00000287814 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
TIMP4-201ENST00000287814 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
TIMP4-201ENST00000287814 VCX2Q9H322 139 aa12.86□□□□□ -0.35
TIMP4-201ENST00000287814 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms