RNA–Protein interactions for RNA: ENST00000276833.9

SLC39A4-201, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2 BASIC

Gene SLC39A4, Length 2,297 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-201ENST00000276833 FAM19A5Q7Z5A7 132 aaPredicted RBP14.01□□□□□ -0.17
SLC39A4-201ENST00000276833 IGHV3-38A0A0C4DH36 116 aa14□□□□□ -0.17
SLC39A4-201ENST00000276833 MALP21145 153 aa14□□□□□ -0.17
SLC39A4-201ENST00000276833 ZNF415Q09FC8 603 aa14□□□□□ -0.17
SLC39A4-201ENST00000276833 HTN1P15515 57 aa13.99□□□□□ -0.17
SLC39A4-201ENST00000276833 HIST2H2BCQ6DN03 193 aa13.99□□□□□ -0.17
SLC39A4-201ENST00000276833 HIST2H2BDQ6DRA6 164 aa13.99□□□□□ -0.17
SLC39A4-201ENST00000276833 SMIM9A6NGZ8 99 aa13.98□□□□□ -0.17
SLC39A4-201ENST00000276833 RPL28P46779 137 aaKnown RBP13.98□□□□□ -0.17
SLC39A4-201ENST00000276833 A8MTW9 85 aa13.98□□□□□ -0.17
SLC39A4-201ENST00000276833 PF4P02776 101 aa13.97□□□□□ -0.17
SLC39A4-201ENST00000276833 DGAT2L7PQ6IED9 249 aa13.97□□□□□ -0.17
SLC39A4-201ENST00000276833 RPL18AQ02543 176 aaKnown RBP13.97□□□□□ -0.17
SLC39A4-201ENST00000276833 PRIMA1Q86XR5 153 aa13.97□□□□□ -0.17
SLC39A4-201ENST00000276833 SPTAN1Q13813 2472 aaKnown RBP13.97□□□□□ -0.17
SLC39A4-201ENST00000276833 Q9HAA7 133 aa13.96□□□□□ -0.17
SLC39A4-201ENST00000276833 SPTA1P02549 2419 aa13.96□□□□□ -0.18
SLC39A4-201ENST00000276833 hADV29S1A0JD25 119 aa13.95□□□□□ -0.18
SLC39A4-201ENST00000276833 PRM2P04554 102 aa13.95□□□□□ -0.18
SLC39A4-201ENST00000276833 CYSTM1Q9H1C7 97 aa13.95□□□□□ -0.18
SLC39A4-201ENST00000276833 F5H768 121 aa13.94□□□□□ -0.18
SLC39A4-201ENST00000276833 CELSR1Q9NYQ6 3014 aa13.94□□□□□ -0.18
SLC39A4-201ENST00000276833 TRAV13-2A0A0B4J235 113 aa13.94□□□□□ -0.18
SLC39A4-201ENST00000276833 OBSCN-AS1Q96MR7 158 aa13.94□□□□□ -0.18
SLC39A4-201ENST00000276833 PTPRQQ9UMZ3 2332 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 Q6JHZ5 121 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 OVOL2Q9BRP0 275 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 SORL1Q92673 2214 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 C11orf72Q8NBR9 251 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 PIMREGQ9BSJ6 248 aa13.93□□□□□ -0.18
SLC39A4-201ENST00000276833 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 RBMY1BA6NDE4 496 aaKnown RBP13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 RBMY1EA6NEQ0 496 aaKnown RBP13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 RBMY1DP0C7P1 496 aaKnown RBP13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 ATP5J2P56134 94 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 DNAL4O96015 105 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 C10orf99Q6UWK7 81 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 NBASA2RRP1 2371 aa13.92□□□□□ -0.18
SLC39A4-201ENST00000276833 RS1O15537 224 aa13.91□□□□□ -0.18
SLC39A4-201ENST00000276833 TMEM89A2RUT3 159 aa13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 TMEM258P61165 79 aa13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 SERP2Q8N6R1 65 aa13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 IGHV4-61A0A0C4DH41 118 aa13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 LINC00337Q8N6G1 96 aa13.9□□□□□ -0.18
SLC39A4-201ENST00000276833 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
SLC39A4-201ENST00000276833 CRPP02741 224 aa13.89□□□□□ -0.19
SLC39A4-201ENST00000276833 IGKV2-28A0A075B6P5 120 aa13.89□□□□□ -0.19
SLC39A4-201ENST00000276833 IGKV2D-28P01615 120 aa13.89□□□□□ -0.19
SLC39A4-201ENST00000276833 OR13C6PQ8NH95 151 aa13.89□□□□□ -0.19
SLC39A4-201ENST00000276833 A0A087WYN8 130 aa13.88□□□□□ -0.19
SLC39A4-201ENST00000276833 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
SLC39A4-201ENST00000276833 C14orf132Q9NPU4 83 aa13.88□□□□□ -0.19
SLC39A4-201ENST00000276833 LINC00846Q9NV44 126 aa13.88□□□□□ -0.19
SLC39A4-201ENST00000276833 DEFB131AP59861 70 aa13.87□□□□□ -0.19
SLC39A4-201ENST00000276833 AKAP6Q13023 2319 aa13.87□□□□□ -0.19
SLC39A4-201ENST00000276833 KLRB1Q12918 225 aa13.87□□□□□ -0.19
SLC39A4-201ENST00000276833 Q96MF0 132 aa13.86□□□□□ -0.19
SLC39A4-201ENST00000276833 IGKV3D-7A0A0C4DH55 119 aa13.85□□□□□ -0.19
SLC39A4-201ENST00000276833 LINC01561Q8N1V8 128 aa13.85□□□□□ -0.19
SLC39A4-201ENST00000276833 SMIM11BQ8TCY0 68 aa13.85□□□□□ -0.19
SLC39A4-201ENST00000276833 CDC42SE2Q9NRR3 84 aa13.85□□□□□ -0.19
SLC39A4-201ENST00000276833 WIPF1O43516 503 aa13.84□□□□□ -0.19
SLC39A4-201ENST00000276833 H0YGX0 51 aa13.84□□□□□ -0.19
SLC39A4-201ENST00000276833 KIR2DL5BQ8NHK3 375 aa13.84□□□□□ -0.19
SLC39A4-201ENST00000276833 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
SLC39A4-201ENST00000276833 NTM-AS1Q6ZSK4 140 aa13.83□□□□□ -0.2
SLC39A4-201ENST00000276833 ZFHX2Q9C0A1 2572 aaPredicted RBP13.83□□□□□ -0.2
SLC39A4-201ENST00000276833 MIR7-3HGQ8N6C7 128 aa13.83□□□□□ -0.2
SLC39A4-201ENST00000276833 CEP295Q9C0D2 2601 aa13.82□□□□□ -0.2
SLC39A4-201ENST00000276833 A0A087WVE0 104 aa13.81□□□□□ -0.2
SLC39A4-201ENST00000276833 USP17L23D6RBM5 183 aa13.81□□□□□ -0.2
SLC39A4-201ENST00000276833 OXTP01178 125 aa13.8□□□□□ -0.2
SLC39A4-201ENST00000276833 C10orf105Q8TEF2 133 aa13.8□□□□□ -0.2
SLC39A4-201ENST00000276833 VPS13CQ709C8 3753 aa13.78□□□□□ -0.2
SLC39A4-201ENST00000276833 TRBV10-1A0A0K0K1A3 114 aa13.78□□□□□ -0.2
SLC39A4-201ENST00000276833 AVPP01185 164 aa13.78□□□□□ -0.2
SLC39A4-201ENST00000276833 COX7B2Q8TF08 81 aa13.78□□□□□ -0.2
SLC39A4-201ENST00000276833 IGHV4-59P01825 116 aa13.77□□□□□ -0.21
SLC39A4-201ENST00000276833 MSMBP08118 114 aa13.77□□□□□ -0.21
SLC39A4-201ENST00000276833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■□□ 16.3
SLC39A4-201ENST00000276833 INSP01308 110 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 CCL18P55774 89 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 NCR3O14931 201 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 LECT2O14960 151 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 UBE2E2Q96LR5 201 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 DSCR8Q96T75 97 aa13.76□□□□□ -0.21
SLC39A4-201ENST00000276833 SS18Q15532 418 aa13.75□□□□□ -0.21
SLC39A4-201ENST00000276833 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
SLC39A4-201ENST00000276833 HIVEP3Q5T1R4 2406 aa13.74□□□□□ -0.21
SLC39A4-201ENST00000276833 K7EQD1 137 aa13.74□□□□□ -0.21
SLC39A4-201ENST00000276833 MAP6D1Q9H9H5 199 aa13.74□□□□□ -0.21
SLC39A4-201ENST00000276833 CREBBPQ92793 2442 aa13.73□□□□□ -0.21
SLC39A4-201ENST00000276833 ATRXP46100 2492 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms