RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 IGHV3-64A0A075B6Q5 118 aa16.4■□□□□ 0.22
RAB40B-201ENST00000269347 INSL3P51460 131 aa16.4■□□□□ 0.22
RAB40B-201ENST00000269347 UBE2D3P61077 147 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 UBE2D2P62837 147 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 RBX1P62877 108 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 C12orf74Q32Q52 190 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 SCGB1D4Q6XE38 83 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 OR5A1Q8NGJ0 315 aa16.39■□□□□ 0.21
RAB40B-201ENST00000269347 TMEM223A0PJW6 202 aa16.38■□□□□ 0.21
RAB40B-201ENST00000269347 OCIAD2Q56VL3 154 aa16.38■□□□□ 0.21
RAB40B-201ENST00000269347 FHL2Q14192 279 aa16.37■□□□□ 0.21
RAB40B-201ENST00000269347 RPL36AP83881 106 aaKnown RBP16.36■□□□□ 0.21
RAB40B-201ENST00000269347 RPL36ALQ969Q0 106 aaKnown RBP16.36■□□□□ 0.21
RAB40B-201ENST00000269347 TRBV10-1A0A0K0K1A3 114 aa16.35■□□□□ 0.21
RAB40B-201ENST00000269347 IGLL5B9A064 214 aa16.35■□□□□ 0.21
RAB40B-201ENST00000269347 DEFB130BP0DP73 79 aa16.35■□□□□ 0.21
RAB40B-201ENST00000269347 DEFB130AP0DP74 79 aa16.35■□□□□ 0.21
RAB40B-201ENST00000269347 MRPS36P82909 103 aaKnown RBP16.34■□□□□ 0.21
RAB40B-201ENST00000269347 KRTAP24-1Q3LI83 254 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 SBSPONQ8IVN8 264 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 DEFB4AO15263 64 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 DEFB135Q30KP9 77 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 WFDC9Q8NEX5 89 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 SPANXA1Q9NS26 97 aa16.34■□□□□ 0.21
RAB40B-201ENST00000269347 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.21
RAB40B-201ENST00000269347 RNF151Q2KHN1 245 aa16.33■□□□□ 0.2
RAB40B-201ENST00000269347 TRAV8-3A0A0A6YYJ7 113 aa16.33■□□□□ 0.2
RAB40B-201ENST00000269347 SRSF9Q13242 221 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAB40B-201ENST00000269347 A0A1B0GWB2 263 aa16.32■□□□□ 0.2
RAB40B-201ENST00000269347 A8MZ25 164 aa16.32■□□□□ 0.2
RAB40B-201ENST00000269347 J3QQQ9 107 aa16.31■□□□□ 0.2
RAB40B-201ENST00000269347 TRGV4A0A0C4DH28 118 aa16.31■□□□□ 0.2
RAB40B-201ENST00000269347 LINC00612Q8N6U2 182 aa16.31■□□□□ 0.2
RAB40B-201ENST00000269347 A0A0J9YY99 117 aa16.3■□□□□ 0.2
RAB40B-201ENST00000269347 TRBV6-4A0A1B0GX49 114 aa16.3■□□□□ 0.2
RAB40B-201ENST00000269347 TMEM238LA0A1B0GVL6 79 aa16.29■□□□□ 0.2
RAB40B-201ENST00000269347 A6NJY4 79 aa16.29■□□□□ 0.2
RAB40B-201ENST00000269347 COX6A2Q02221 97 aa16.29■□□□□ 0.2
RAB40B-201ENST00000269347 DAZ4Q86SG3 579 aaKnown RBP16.29■□□□□ 0.2
RAB40B-201ENST00000269347 DAZ3Q9NR90 486 aaKnown RBP16.29■□□□□ 0.2
RAB40B-201ENST00000269347 K7ERU9 68 aa16.28■□□□□ 0.2
RAB40B-201ENST00000269347 LGALS3P17931 250 aaKnown RBP16.28■□□□□ 0.2
RAB40B-201ENST00000269347 UBE2D1P51668 147 aa16.28■□□□□ 0.2
RAB40B-201ENST00000269347 CRYBA4P53673 196 aa16.28■□□□□ 0.2
RAB40B-201ENST00000269347 KIR2DL5BQ8NHK3 375 aa16.27■□□□□ 0.2
RAB40B-201ENST00000269347 LEPROTO15243 131 aa16.27■□□□□ 0.19
RAB40B-201ENST00000269347 OXLD1Q5BKU9 147 aa16.26■□□□□ 0.19
RAB40B-201ENST00000269347 IGHV3-30-3P0DP02 117 aa16.26■□□□□ 0.19
RAB40B-201ENST00000269347 MAST4O15021 2626 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 TINCRA0A1B0GVN0 87 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 SPINK8P0C7L1 97 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 FAM222AQ5U5X8 452 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 C10orf126Q8N4M7 172 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 DNAH3Q8TD57 4116 aa16.25■□□□□ 0.19
RAB40B-201ENST00000269347 TIMM21Q9BVV7 248 aa16.24■□□□□ 0.19
RAB40B-201ENST00000269347 SPANXB1Q9NS25 103 aaPredicted RBP16.24■□□□□ 0.19
RAB40B-201ENST00000269347 CDKN2A-AS1Q9UH64 79 aa16.24■□□□□ 0.19
RAB40B-201ENST00000269347 WIPF1O43516 503 aa16.24■□□□□ 0.19
RAB40B-201ENST00000269347 IGHV4-30-4P0DP06 118 aa16.23■□□□□ 0.19
RAB40B-201ENST00000269347 VPS25Q9BRG1 176 aa16.23■□□□□ 0.19
RAB40B-201ENST00000269347 KRTAP10-11P60412 298 aa16.22■□□□□ 0.19
RAB40B-201ENST00000269347 LINC00242Q5T6M2 205 aa16.22■□□□□ 0.19
RAB40B-201ENST00000269347 DGAT2L7PQ6IED9 249 aa16.22■□□□□ 0.19
RAB40B-201ENST00000269347 PGPEP1Q9NXJ5 209 aa16.22■□□□□ 0.19
RAB40B-201ENST00000269347 CELA1Q9UNI1 258 aa16.22■□□□□ 0.19
RAB40B-201ENST00000269347 IGHV4-28A0A0C4DH34 117 aa16.21■□□□□ 0.19
RAB40B-201ENST00000269347 CDC42SE2Q9NRR3 84 aa16.21■□□□□ 0.19
RAB40B-201ENST00000269347 GTSF1LQ9H1H1 148 aa16.21■□□□□ 0.19
RAB40B-201ENST00000269347 PRIMA1Q86XR5 153 aa16.2■□□□□ 0.18
RAB40B-201ENST00000269347 IGHV3-30P01768 117 aa16.2■□□□□ 0.18
RAB40B-201ENST00000269347 IGHV3-30-5P0DP03 117 aa16.2■□□□□ 0.18
RAB40B-201ENST00000269347 SMIM9A6NGZ8 99 aa16.19■□□□□ 0.18
RAB40B-201ENST00000269347 TRAV13-1A0A0B4J241 112 aa16.19■□□□□ 0.18
RAB40B-201ENST00000269347 IGHV1-58A0A0C4DH39 117 aa16.19■□□□□ 0.18
RAB40B-201ENST00000269347 Q8NAQ8 132 aa16.19■□□□□ 0.18
RAB40B-201ENST00000269347 TMEM243Q9BU79 118 aa16.19■□□□□ 0.18
RAB40B-201ENST00000269347 CIDEAO60543 219 aa16.18■□□□□ 0.18
RAB40B-201ENST00000269347 APOMO95445 188 aa16.18■□□□□ 0.18
RAB40B-201ENST00000269347 GAGE6Q13070 117 aa16.18■□□□□ 0.18
RAB40B-201ENST00000269347 VSIG2Q96IQ7 327 aa16.18■□□□□ 0.18
RAB40B-201ENST00000269347 CSDC2Q9Y534 153 aaKnown RBP16.18■□□□□ 0.18
RAB40B-201ENST00000269347 IGLV4-60A0A075B6I1 120 aa16.17■□□□□ 0.18
RAB40B-201ENST00000269347 IGLV5-45A0A087WSX0 123 aa16.17■□□□□ 0.18
RAB40B-201ENST00000269347 A0A096LPF7 62 aa16.17■□□□□ 0.18
RAB40B-201ENST00000269347 H3BMG7 143 aa16.17■□□□□ 0.18
RAB40B-201ENST00000269347 GYPEP15421 78 aa16.17■□□□□ 0.18
RAB40B-201ENST00000269347 TRBV6-8A0A0A6YYG3 113 aa16.16■□□□□ 0.18
RAB40B-201ENST00000269347 APOC4P55056 127 aa16.16■□□□□ 0.18
RAB40B-201ENST00000269347 COL6A5A8TX70 2615 aa16.16■□□□□ 0.18
RAB40B-201ENST00000269347 A0A0J9YXY3 114 aa16.16■□□□□ 0.18
RAB40B-201ENST00000269347 EIF4EBP3O60516 100 aaPredicted RBP16.16■□□□□ 0.18
RAB40B-201ENST00000269347 GEMIN7Q9H840 131 aaKnown RBP16.16■□□□□ 0.18
RAB40B-201ENST00000269347 F8W1H4 67 aa16.15■□□□□ 0.18
RAB40B-201ENST00000269347 TIRAPP58753 221 aa16.15■□□□□ 0.18
RAB40B-201ENST00000269347 LITAFQ99732 161 aa16.15■□□□□ 0.18
RAB40B-201ENST00000269347 TENM3Q9P273 2699 aa16.15■□□□□ 0.18
RAB40B-201ENST00000269347 G3V4G9 280 aa16.14■□□□□ 0.17
RAB40B-201ENST00000269347 TSPAN13O95857 204 aa16.14■□□□□ 0.17
RAB40B-201ENST00000269347 TMEM101Q96IK0 257 aa16.14■□□□□ 0.17
RAB40B-201ENST00000269347 RPL24P83731 157 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms