RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MAP1LC3AQ9H492 121 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 PRR34Q9NV39 138 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 TRAV9-1A0A075B6T8 112 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 EREGO14944 169 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 Q0VG73 95 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 RMI2Q96E14 147 aa4.79□□□□□ -1.64
DEPDC1B-201ENST00000265036 RAB5AP20339 215 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 IFI27P40305 119 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 XCL1P47992 114 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 Q8N814 137 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 TMEM101Q96IK0 257 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 GNB1LQ9BYB4 327 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
DEPDC1B-201ENST00000265036 RYR1P21817 5038 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 PHOX2AO14813 284 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 SCO1O75880 301 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 IGLV5-52A0A0A0MRZ9 124 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 ZC2HC1BQ5TFG8 222 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 CHCHD10Q8WYQ3 142 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 ALKBH7Q9BT30 221 aaPredicted RBP4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 CDC42SE2Q9NRR3 84 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
DEPDC1B-201ENST00000265036 FAT1Q14517 4588 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 H7C423 109 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 CCL25O15444 150 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 ZNF25P17030 456 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 RPL32P62910 135 aaKnown RBP4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 ZNF664Q8N3J9 261 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 Q8N8P6 123 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 LAMTOR2Q9Y2Q5 125 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 HERC2O95714 4834 aa4.76□□□□□ -1.65
DEPDC1B-201ENST00000265036 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 MT-ND6P03923 174 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 HIGD2BQ4VC39 106 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 MRPL52Q86TS9 123 aaKnown RBP4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 LINC00526Q96FQ7 95 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 YPEL4Q96NS1 127 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 LINC00959A0A1B0GUT2 108 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 PRSS3P2Q8NHM4 247 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 FAM104AQ969W3 186 aa4.75□□□□□ -1.65
DEPDC1B-201ENST00000265036 hDV102S1A0JD36 115 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 TRAV8-4A0A0B4J246 113 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 PRSS1P07477 247 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 PMCHL1Q16048 86 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 CYSLTR1Q9Y271 337 aa4.74□□□□□ -1.65
DEPDC1B-201ENST00000265036 IGLV4-3A0A075B6K6 122 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 COX19Q49B96 90 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 C15orf56Q8N910 161 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 C18orf32Q8TCD1 76 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 NTN5Q8WTR8 489 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 SPANXA1Q9NS26 97 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 DNAH8Q96JB1 4490 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 GCSHP23434 173 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 FOXI1Q12951 378 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 SS18Q15532 418 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 ORMDL2Q53FV1 153 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 FA2HQ7L5A8 372 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 PGPEP1Q9NXJ5 209 aa4.73□□□□□ -1.65
DEPDC1B-201ENST00000265036 PRSS47A8MTI9 375 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 C5orf38Q86SI9 138 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 TRGC2P03986 189 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 CDPF1Q6NVV7 123 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 TIMM21Q9BVV7 248 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 FAM30AQ9NZY2 134 aa4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 CSDC2Q9Y534 153 aaKnown RBP4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
DEPDC1B-201ENST00000265036 C1orf196B1AJZ1 125 aa4.71□□□□□ -1.65
DEPDC1B-201ENST00000265036 TMEM141Q96I45 108 aa4.71□□□□□ -1.65
DEPDC1B-201ENST00000265036 AP5S1Q9NUS5 200 aa4.71□□□□□ -1.65
DEPDC1B-201ENST00000265036 SLPIP03973 132 aa4.71□□□□□ -1.66
DEPDC1B-201ENST00000265036 SMAGPQ0VAQ4 97 aa4.71□□□□□ -1.66
DEPDC1B-201ENST00000265036 LINC00173Q6ZV60 143 aa4.71□□□□□ -1.66
DEPDC1B-201ENST00000265036 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
DEPDC1B-201ENST00000265036 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
DEPDC1B-201ENST00000265036 A0A096LNJ9 63 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 MALP21145 153 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 CD164L2Q6UWJ8 174 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 Q6ZN92 141 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 TEX43Q6ZNM6 134 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGIPA6NJ69 53 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 COLCA2A8K830 154 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 COX7A2LO14548 114 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 MRPS36P82909 103 aaKnown RBP4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 COX6A2Q02221 97 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms