RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 FAM236BA0A1B0GV22 79 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 NDUFV3P56181 108 aaKnown RBP12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 SOCS3O14543 225 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 MUC4Q99102 2169 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 PF4P02776 101 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 Q9HAA7 133 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 PRO0461Q9UI25 63 aa12.95□□□□□ -0.34
NDFIP1-201ENST00000253814 LINC01546A6NGU7 62 aa12.94□□□□□ -0.34
NDFIP1-201ENST00000253814 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
NDFIP1-201ENST00000253814 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
NDFIP1-201ENST00000253814 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
NDFIP1-201ENST00000253814 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
NDFIP1-201ENST00000253814 CDIP1Q9H305 208 aa12.93□□□□□ -0.34
NDFIP1-201ENST00000253814 MALP21145 153 aa12.92□□□□□ -0.34
NDFIP1-201ENST00000253814 C18orf65Q6ZTR6 163 aa12.92□□□□□ -0.34
NDFIP1-201ENST00000253814 H3BT86 120 aa12.92□□□□□ -0.34
NDFIP1-201ENST00000253814 LAMA5O15230 3695 aa12.91□□□□□ -0.34
NDFIP1-201ENST00000253814 KIF25-AS1Q9Y6Z4 181 aa12.91□□□□□ -0.34
NDFIP1-201ENST00000253814 PSMB8P28062 276 aa12.91□□□□□ -0.34
NDFIP1-201ENST00000253814 POM121L12Q8N7R1 296 aa12.91□□□□□ -0.34
NDFIP1-201ENST00000253814 INAFM2P0DMQ5 153 aa12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 PIK3CD-AS1Q5SR53 167 aa12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 Q96MF0 132 aa12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 NDUFA7O95182 113 aa12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 ADAMTSL4-AS1Q5T5F5 129 aa12.9□□□□□ -0.34
NDFIP1-201ENST00000253814 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 XCL1P47992 114 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 LINC00315P59091 139 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 PRB1P04280 392 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 Q6ZTI0 123 aa12.89□□□□□ -0.35
NDFIP1-201ENST00000253814 TNRC18O15417 2968 aaPredicted RBP12.88□□□□□ -0.35
NDFIP1-201ENST00000253814 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
NDFIP1-201ENST00000253814 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
NDFIP1-201ENST00000253814 IGKV3D-7A0A0C4DH55 119 aa12.88□□□□□ -0.35
NDFIP1-201ENST00000253814 S100A7L2Q5SY68 101 aa12.88□□□□□ -0.35
NDFIP1-201ENST00000253814 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
NDFIP1-201ENST00000253814 TRAV13-2A0A0B4J235 113 aa12.87□□□□□ -0.35
NDFIP1-201ENST00000253814 CRLF1O75462 422 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 ATP5G1P05496 136 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 H7C423 109 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 K7EQD1 137 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 Q9UF83 564 aa12.86□□□□□ -0.35
NDFIP1-201ENST00000253814 DAZ2Q13117 558 aaKnown RBP12.84□□□□□ -0.35
NDFIP1-201ENST00000253814 DAZ4Q86SG3 579 aaKnown RBP12.84□□□□□ -0.35
NDFIP1-201ENST00000253814 DAZ3Q9NR90 486 aaKnown RBP12.84□□□□□ -0.35
NDFIP1-201ENST00000253814 J3QLI3 93 aa12.84□□□□□ -0.35
NDFIP1-201ENST00000253814 UBE2D4Q9Y2X8 147 aa12.84□□□□□ -0.35
NDFIP1-201ENST00000253814 CCL24O00175 119 aa12.83□□□□□ -0.36
NDFIP1-201ENST00000253814 LAMTOR3Q9UHA4 124 aa12.83□□□□□ -0.36
NDFIP1-201ENST00000253814 MRPS36P82909 103 aaKnown RBP12.83□□□□□ -0.36
NDFIP1-201ENST00000253814 PYGO1Q9Y3Y4 419 aa12.83□□□□□ -0.36
NDFIP1-201ENST00000253814 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
NDFIP1-201ENST00000253814 LECT2O14960 151 aa12.82□□□□□ -0.36
NDFIP1-201ENST00000253814 SS18Q15532 418 aa12.82□□□□□ -0.36
NDFIP1-201ENST00000253814 Q6ZSN1 163 aa12.82□□□□□ -0.36
NDFIP1-201ENST00000253814 IGLV10-54A0A075B6I4 117 aa12.81□□□□□ -0.36
NDFIP1-201ENST00000253814 COX7A2LO14548 114 aa12.81□□□□□ -0.36
NDFIP1-201ENST00000253814 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
NDFIP1-201ENST00000253814 LST1O00453 97 aa12.8□□□□□ -0.36
NDFIP1-201ENST00000253814 ASH1LQ9NR48 2969 aaKnown RBP12.8□□□□□ -0.36
NDFIP1-201ENST00000253814 HERV-K104P63124 156 aa12.8□□□□□ -0.36
NDFIP1-201ENST00000253814 C14orf132Q9NPU4 83 aa12.8□□□□□ -0.36
NDFIP1-201ENST00000253814 COL12A1Q99715 3063 aa12.79□□□□□ -0.36
NDFIP1-201ENST00000253814 OVOL2Q9BRP0 275 aa12.78□□□□□ -0.36
NDFIP1-201ENST00000253814 NDUFA1O15239 70 aa12.77□□□□□ -0.36
NDFIP1-201ENST00000253814 ACYP1P07311 99 aa12.77□□□□□ -0.36
NDFIP1-201ENST00000253814 COX6A2Q02221 97 aa12.77□□□□□ -0.37
NDFIP1-201ENST00000253814 FHL3Q13643 280 aa12.77□□□□□ -0.37
NDFIP1-201ENST00000253814 DEFB114Q30KQ6 69 aa12.77□□□□□ -0.37
NDFIP1-201ENST00000253814 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.37
NDFIP1-201ENST00000253814 SPANXCQ9NY87 97 aa12.77□□□□□ -0.37
NDFIP1-201ENST00000253814 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
NDFIP1-201ENST00000253814 SLPIP03973 132 aa12.76□□□□□ -0.37
NDFIP1-201ENST00000253814 RNF152Q8N8N0 203 aa12.76□□□□□ -0.37
NDFIP1-201ENST00000253814 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 LOC100131303A0A0U1RQF7 123 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 ANGP03950 147 aaKnown RBP12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 MRPL23Q16540 153 aaKnown RBP12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 HIST2H2BCQ6DN03 193 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 CHCHD7Q9BUK0 85 aa12.75□□□□□ -0.37
NDFIP1-201ENST00000253814 LINC00242Q5T6M2 205 aa12.74□□□□□ -0.37
NDFIP1-201ENST00000253814 SDIM1Q6ZPB5 146 aa12.74□□□□□ -0.37
NDFIP1-201ENST00000253814 AMELXQ99217 191 aa12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 SMG1Q96Q15 3661 aaKnown RBP12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 GYPEP15421 78 aa12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 ZNF702PQ9H963 129 aa12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 A0A1B0GX51 115 aa12.73□□□□□ -0.37
NDFIP1-201ENST00000253814 TIRAPP58753 221 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms