RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 PTPN13Q12923 2485 aa14.55□□□□□ -0.08
CACTIN-202ENST00000248420 SONP18583 2426 aaKnown RBP14.55□□□□□ -0.08
CACTIN-202ENST00000248420 IGHV3OR16-12A0A075B7B8 117 aa14.55□□□□□ -0.08
CACTIN-202ENST00000248420 ZNF469Q96JG9 3925 aaPredicted RBP14.54□□□□□ -0.08
CACTIN-202ENST00000248420 DGAT2L7PQ6IED9 249 aa14.54□□□□□ -0.08
CACTIN-202ENST00000248420 CITED2Q99967 270 aaPredicted RBP14.54□□□□□ -0.08
CACTIN-202ENST00000248420 IGSF10Q6WRI0 2623 aa14.53□□□□□ -0.08
CACTIN-202ENST00000248420 ZFYVE26Q68DK2 2539 aa14.53□□□□□ -0.08
CACTIN-202ENST00000248420 LST1O00453 97 aa14.53□□□□□ -0.08
CACTIN-202ENST00000248420 Q9H8V8 135 aa14.53□□□□□ -0.08
CACTIN-202ENST00000248420 LRRK2Q5S007 2527 aa14.53□□□□□ -0.08
CACTIN-202ENST00000248420 SPANXA1Q9NS26 97 aa14.52□□□□□ -0.09
CACTIN-202ENST00000248420 LINC00694P0DN24 101 aa14.51□□□□□ -0.09
CACTIN-202ENST00000248420 KHDC1LQ5JSQ8 128 aa14.51□□□□□ -0.09
CACTIN-202ENST00000248420 Q8N2B8 174 aa14.51□□□□□ -0.09
CACTIN-202ENST00000248420 TRAV13-1A0A0B4J241 112 aa14.5□□□□□ -0.09
CACTIN-202ENST00000248420 IGHV3-53P01767 116 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 ZNF415Q09FC8 603 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 C3orf56Q8N813 242 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 XCL2Q9UBD3 114 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE12JA6NER3 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE7O76087 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE12FP0CL80 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE12GP0CL81 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE12IP0CL82 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 GAGE4Q13068 117 aa14.49□□□□□ -0.09
CACTIN-202ENST00000248420 NAV2Q8IVL1 2488 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 H3BT86 120 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 UBE2E2Q96LR5 201 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 SOSTDC1Q6X4U4 206 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 C11orf72Q8NBR9 251 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 LINC00308Q8TCZ7 52 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 CHCHD5Q9BSY4 110 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 ZNF702PQ9H963 129 aa14.48□□□□□ -0.09
CACTIN-202ENST00000248420 TMEM89A2RUT3 159 aa14.47□□□□□ -0.09
CACTIN-202ENST00000248420 EDA2RQ9HAV5 297 aa14.47□□□□□ -0.09
CACTIN-202ENST00000248420 YAE1D1Q9NRH1 226 aa14.47□□□□□ -0.09
CACTIN-202ENST00000248420 LINC00242Q5T6M2 205 aa14.46□□□□□ -0.09
CACTIN-202ENST00000248420 PIEZO1Q92508 2521 aa14.46□□□□□ -0.09
CACTIN-202ENST00000248420 NDUFA1O15239 70 aa14.46□□□□□ -0.1
CACTIN-202ENST00000248420 RNF152Q8N8N0 203 aa14.45□□□□□ -0.1
CACTIN-202ENST00000248420 LINC01600Q96MT4 127 aa14.45□□□□□ -0.1
CACTIN-202ENST00000248420 MAP6D1Q9H9H5 199 aa14.45□□□□□ -0.1
CACTIN-202ENST00000248420 VPREB3Q9UKI3 123 aa14.44□□□□□ -0.1
CACTIN-202ENST00000248420 CIRBPQ14011 172 aaKnown RBP14.44□□□□□ -0.1
CACTIN-202ENST00000248420 MEIG1Q5JSS6 88 aa14.43□□□□□ -0.1
CACTIN-202ENST00000248420 PIK3CD-AS1Q5SR53 167 aa14.43□□□□□ -0.1
CACTIN-202ENST00000248420 TRGV1A0A0A0MS02 117 aa14.42□□□□□ -0.1
CACTIN-202ENST00000248420 LINC01356Q8N9X3 169 aa14.42□□□□□ -0.1
CACTIN-202ENST00000248420 C11orf44Q8N8P7 122 aa14.42□□□□□ -0.1
CACTIN-202ENST00000248420 SETXQ7Z333 2677 aaKnown RBP14.42□□□□□ -0.1
CACTIN-202ENST00000248420 PRIMA1Q86XR5 153 aa14.41□□□□□ -0.1
CACTIN-202ENST00000248420 TIRAPP58753 221 aa14.4□□□□□ -0.1
CACTIN-202ENST00000248420 Q6Q795 121 aa14.4□□□□□ -0.1
CACTIN-202ENST00000248420 DYNLRB2Q8TF09 96 aa14.4□□□□□ -0.1
CACTIN-202ENST00000248420 SMIM1B2RUZ4 78 aa14.4□□□□□ -0.1
CACTIN-202ENST00000248420 PRORYQ9H606 182 aa14.4□□□□□ -0.1
CACTIN-202ENST00000248420 TIMM17BO60830 172 aa14.39□□□□□ -0.11
CACTIN-202ENST00000248420 CCDC168Q8NDH2 2452 aa14.39□□□□□ -0.11
CACTIN-202ENST00000248420 IGLV5-45A0A087WSX0 123 aa14.39□□□□□ -0.11
CACTIN-202ENST00000248420 NTM-AS1Q6ZSK4 140 aa14.39□□□□□ -0.11
CACTIN-202ENST00000248420 SVIPQ8NHG7 77 aa14.39□□□□□ -0.11
CACTIN-202ENST00000248420 IGKV3OR2-268A0A0C4DH90 116 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 RS1O15537 224 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 FAM218AQ96MZ4 157 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 IGLV5-39A0A0G2JS06 123 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 INSP01308 110 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 HERVK_113P63121 156 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 SMCR5Q8TEV8 140 aa14.38□□□□□ -0.11
CACTIN-202ENST00000248420 Q6ZTI0 123 aa14.37□□□□□ -0.11
CACTIN-202ENST00000248420 COX7A2LO14548 114 aa14.37□□□□□ -0.11
CACTIN-202ENST00000248420 DAZ2Q13117 558 aaKnown RBP14.37□□□□□ -0.11
CACTIN-202ENST00000248420 DAZ4Q86SG3 579 aaKnown RBP14.37□□□□□ -0.11
CACTIN-202ENST00000248420 DNAJC30Q96LL9 226 aa14.37□□□□□ -0.11
CACTIN-202ENST00000248420 Q9HAA7 133 aa14.37□□□□□ -0.11
CACTIN-202ENST00000248420 DAZ3Q9NR90 486 aaKnown RBP14.37□□□□□ -0.11
CACTIN-202ENST00000248420 BEAN1Q3B7T3 259 aa14.36□□□□□ -0.11
CACTIN-202ENST00000248420 A8MTW9 85 aa14.36□□□□□ -0.11
CACTIN-202ENST00000248420 DEFB121Q5J5C9 76 aa14.36□□□□□ -0.11
CACTIN-202ENST00000248420 Q6YL49 198 aa14.36□□□□□ -0.11
CACTIN-202ENST00000248420 Q96MF0 132 aa14.36□□□□□ -0.11
CACTIN-202ENST00000248420 ZNF462Q96JM2 2506 aa14.35□□□□□ -0.11
CACTIN-202ENST00000248420 SMIM20Q8N5G0 67 aa14.35□□□□□ -0.11
CACTIN-202ENST00000248420 C1orf158Q8N1D5 194 aa14.34□□□□□ -0.11
CACTIN-202ENST00000248420 FAM236AA0A1B0GUQ0 79 aa14.34□□□□□ -0.11
CACTIN-202ENST00000248420 FAM236BA0A1B0GV22 79 aa14.34□□□□□ -0.11
CACTIN-202ENST00000248420 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
CACTIN-202ENST00000248420 DEFB114Q30KQ6 69 aa14.34□□□□□ -0.11
CACTIN-202ENST00000248420 BAALC-AS2P0C853 105 aa14.33□□□□□ -0.12
CACTIN-202ENST00000248420 FAM240AA0A1B0GVK7 77 aa14.33□□□□□ -0.12
CACTIN-202ENST00000248420 SHISA2Q6UWI4 295 aa14.33□□□□□ -0.12
CACTIN-202ENST00000248420 TOMM7Q9P0U1 55 aa14.32□□□□□ -0.12
CACTIN-202ENST00000248420 PEMTQ9UBM1 199 aa14.32□□□□□ -0.12
CACTIN-202ENST00000248420 A0A096LNT2 108 aa14.32□□□□□ -0.12
CACTIN-202ENST00000248420 ODF3L2Q3SX64 289 aa14.32□□□□□ -0.12
CACTIN-202ENST00000248420 FN1P02751 2386 aaKnown RBP14.31□□□□□ -0.12
CACTIN-202ENST00000248420 LOC100131303A0A0U1RQF7 123 aa14.31□□□□□ -0.12
CACTIN-202ENST00000248420 PLA2G2AP14555 144 aa14.3□□□□□ -0.12
CACTIN-202ENST00000248420 RPL36AP83881 106 aaKnown RBP14.3□□□□□ -0.12
CACTIN-202ENST00000248420 STHQ8IWL8 128 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms