RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 ZNF415Q09FC8 603 aa11.28□□□□□ -0.6
CTSD-201ENST00000236671 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
CTSD-201ENST00000236671 C9JAW5 83 aa11.27□□□□□ -0.6
CTSD-201ENST00000236671 MT-ATP8P03928 68 aa11.27□□□□□ -0.6
CTSD-201ENST00000236671 XGP55808 180 aa11.27□□□□□ -0.6
CTSD-201ENST00000236671 Q6ZUT4 128 aa11.27□□□□□ -0.6
CTSD-201ENST00000236671 SPANXA1Q9NS26 97 aa11.27□□□□□ -0.6
CTSD-201ENST00000236671 A0A1B0GV72 72 aa11.27□□□□□ -0.61
CTSD-201ENST00000236671 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
CTSD-201ENST00000236671 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 VSIG2Q96IQ7 327 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
CTSD-201ENST00000236671 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
CTSD-201ENST00000236671 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
CTSD-201ENST00000236671 Q1RN00 199 aa11.25□□□□□ -0.61
CTSD-201ENST00000236671 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
CTSD-201ENST00000236671 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
CTSD-201ENST00000236671 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
CTSD-201ENST00000236671 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
CTSD-201ENST00000236671 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
CTSD-201ENST00000236671 A8MZ25 164 aa11.24□□□□□ -0.61
CTSD-201ENST00000236671 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 TRIAP1O43715 76 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 CKS1BP61024 79 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 MIAQ16674 131 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 Q8N2B8 174 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 PEMTQ9UBM1 199 aa11.23□□□□□ -0.61
CTSD-201ENST00000236671 PRSS2P07478 247 aa11.22□□□□□ -0.61
CTSD-201ENST00000236671 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
CTSD-201ENST00000236671 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
CTSD-201ENST00000236671 LINC01587Q99440 93 aa11.22□□□□□ -0.61
CTSD-201ENST00000236671 CRLF1O75462 422 aa11.21□□□□□ -0.61
CTSD-201ENST00000236671 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.61
CTSD-201ENST00000236671 C4orf3Q8WVX3 66 aa11.21□□□□□ -0.61
CTSD-201ENST00000236671 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
CTSD-201ENST00000236671 STAB1Q9NY15 2570 aa11.2□□□□□ -0.62
CTSD-201ENST00000236671 RS1O15537 224 aa11.2□□□□□ -0.62
CTSD-201ENST00000236671 INSP01308 110 aa11.2□□□□□ -0.62
CTSD-201ENST00000236671 ESM1Q9NQ30 184 aa11.2□□□□□ -0.62
CTSD-201ENST00000236671 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
CTSD-201ENST00000236671 IGLV5-45A0A087WSX0 123 aa11.19□□□□□ -0.62
CTSD-201ENST00000236671 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
CTSD-201ENST00000236671 DYNLRB2Q8TF09 96 aa11.19□□□□□ -0.62
CTSD-201ENST00000236671 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
CTSD-201ENST00000236671 NPC2P61916 151 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
CTSD-201ENST00000236671 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 TRRAPQ9Y4A5 3859 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 TIMM17BO60830 172 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 Q6ZSV7 163 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 RNF183Q96D59 192 aa11.18□□□□□ -0.62
CTSD-201ENST00000236671 TIRAPP58753 221 aa11.17□□□□□ -0.62
CTSD-201ENST00000236671 KHDC1LQ5JSQ8 128 aa11.17□□□□□ -0.62
CTSD-201ENST00000236671 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
CTSD-201ENST00000236671 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
CTSD-201ENST00000236671 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
CTSD-201ENST00000236671 NDUFA1O15239 70 aa11.16□□□□□ -0.62
CTSD-201ENST00000236671 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
CTSD-201ENST00000236671 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
CTSD-201ENST00000236671 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
CTSD-201ENST00000236671 COX6A2Q02221 97 aa11.15□□□□□ -0.62
CTSD-201ENST00000236671 ODF3L2Q3SX64 289 aa11.15□□□□□ -0.62
CTSD-201ENST00000236671 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
CTSD-201ENST00000236671 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 IFITM1P13164 125 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 DAND5Q8N907 189 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 CITED1Q99966 193 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 VWFP04275 2813 aa11.14□□□□□ -0.63
CTSD-201ENST00000236671 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
CTSD-201ENST00000236671 H7C423 109 aa11.13□□□□□ -0.63
CTSD-201ENST00000236671 DGAT2L7PQ6IED9 249 aa11.13□□□□□ -0.63
CTSD-201ENST00000236671 COX6CP09669 75 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 CLEC2BQ92478 149 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
CTSD-201ENST00000236671 LST1O00453 97 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 HERVK_113P63121 156 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 H3BT86 120 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 DNHD1Q96M86 4753 aa11.11□□□□□ -0.63
CTSD-201ENST00000236671 Q9H8V8 135 aa11.1□□□□□ -0.63
CTSD-201ENST00000236671 NDUFA7O95182 113 aa11.09□□□□□ -0.63
CTSD-201ENST00000236671 STHQ8IWL8 128 aa11.09□□□□□ -0.63
CTSD-201ENST00000236671 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms