RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
DDX1-201ENST00000233084 CITED2Q99967 270 aaPredicted RBP11.58□□□□□ -0.56
DDX1-201ENST00000233084 TRAV12-2A0A075B6T6 113 aa11.58□□□□□ -0.56
DDX1-201ENST00000233084 IGHV3-73A0A0B4J1V6 119 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 A0A1B0GX51 115 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 OR13C6PQ8NH95 151 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
DDX1-201ENST00000233084 MINOS1Q5TGZ0 78 aa11.56□□□□□ -0.56
DDX1-201ENST00000233084 IGHV3-11P01762 117 aa11.56□□□□□ -0.56
DDX1-201ENST00000233084 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
DDX1-201ENST00000233084 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
DDX1-201ENST00000233084 FLNAP21333 2647 aaKnown RBP11.55□□□□□ -0.56
DDX1-201ENST00000233084 BAALC-AS2P0C853 105 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 TIRAPP58753 221 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 Q8N2B8 174 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 MAPK1IP1LQ8NDC0 245 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 MSMBP08118 114 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 MRPS36P82909 103 aaKnown RBP11.55□□□□□ -0.56
DDX1-201ENST00000233084 KLK9Q9UKQ9 250 aa11.55□□□□□ -0.56
DDX1-201ENST00000233084 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 Q96MF0 132 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 TRACP01848 142 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 CRYGAP11844 174 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
DDX1-201ENST00000233084 B4DSR2 109 aa11.53□□□□□ -0.56
DDX1-201ENST00000233084 ATP5G1P05496 136 aa11.53□□□□□ -0.56
DDX1-201ENST00000233084 DSCR8Q96T75 97 aa11.53□□□□□ -0.56
DDX1-201ENST00000233084 KLLNB2CW77 178 aa11.53□□□□□ -0.56
DDX1-201ENST00000233084 COX7A2LO14548 114 aa11.53□□□□□ -0.56
DDX1-201ENST00000233084 EDN2P20800 178 aa11.52□□□□□ -0.56
DDX1-201ENST00000233084 Q9HAA7 133 aa11.52□□□□□ -0.56
DDX1-201ENST00000233084 PEMTQ9UBM1 199 aa11.52□□□□□ -0.57
DDX1-201ENST00000233084 TRAV25A0A0B4J276 109 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 IGHV3-16A0A0C4DH30 117 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 PROK1P58294 105 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 PF4V1P10720 104 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 WFDC11Q8NEX6 87 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 SORL1Q92673 2214 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 ATOX1O00244 68 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 HTN1P15515 57 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
DDX1-201ENST00000233084 CXCL5P42830 114 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 C4orf26Q17RF5 130 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 LINC01356Q8N9X3 169 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 MINOS1-NBL1R4GNA1 71 aa11.51□□□□□ -0.57
DDX1-201ENST00000233084 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
DDX1-201ENST00000233084 A0A087WVE0 104 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
DDX1-201ENST00000233084 LINC00308Q8TCZ7 52 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 Q9UF83 564 aa11.5□□□□□ -0.57
DDX1-201ENST00000233084 NOTCH2Q04721 2471 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 OXTP01178 125 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 IGHV4-31P0DP07 118 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 SAA4P35542 130 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 AVPP01185 164 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
DDX1-201ENST00000233084 C9orf85Q96MD7 179 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 C22orf24Q9Y442 160 aa11.49□□□□□ -0.57
DDX1-201ENST00000233084 HRCT1Q6UXD1 115 aa11.48□□□□□ -0.57
DDX1-201ENST00000233084 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
DDX1-201ENST00000233084 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
DDX1-201ENST00000233084 Q9H8V8 135 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 NDUFA4O00483 81 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 IGHG2P01859 326 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
DDX1-201ENST00000233084 ACANP16112 2415 aa11.46□□□□□ -0.58
DDX1-201ENST00000233084 KNCNA6PVL3 124 aa11.46□□□□□ -0.58
DDX1-201ENST00000233084 SPINK13Q1W4C9 94 aa11.46□□□□□ -0.58
DDX1-201ENST00000233084 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.58
DDX1-201ENST00000233084 PYGO1Q9Y3Y4 419 aa11.46□□□□□ -0.58
DDX1-201ENST00000233084 HIST1H4AP62805 103 aaKnown RBP11.45□□□□□ -0.58
DDX1-201ENST00000233084 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
DDX1-201ENST00000233084 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
DDX1-201ENST00000233084 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
DDX1-201ENST00000233084 BRD3OSQ6XYD6 125 aa11.45□□□□□ -0.58
DDX1-201ENST00000233084 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
DDX1-201ENST00000233084 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
DDX1-201ENST00000233084 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
DDX1-201ENST00000233084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.44□□□□□ -0.58
DDX1-201ENST00000233084 INAFM2P0DMQ5 153 aa11.44□□□□□ -0.58
DDX1-201ENST00000233084 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
DDX1-201ENST00000233084 FAM223BA6NKX1 122 aa11.44□□□□□ -0.58
DDX1-201ENST00000233084 WIPF1O43516 503 aa11.44□□□□□ -0.58
DDX1-201ENST00000233084 TIMM17BO60830 172 aa11.44□□□□□ -0.58
DDX1-201ENST00000233084 DNAL4O96015 105 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms