RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
GCDH-201ENST00000222214 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
GCDH-201ENST00000222214 UBE2D1P51668 147 aa12.49□□□□□ -0.41
GCDH-201ENST00000222214 TIRAPP58753 221 aa12.49□□□□□ -0.41
GCDH-201ENST00000222214 TMEM243Q9BU79 118 aa12.49□□□□□ -0.41
GCDH-201ENST00000222214 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
GCDH-201ENST00000222214 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
GCDH-201ENST00000222214 SPANXB1Q9NS25 103 aaPredicted RBP12.48□□□□□ -0.41
GCDH-201ENST00000222214 F8P00451 2351 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 A0A0J9YY99 117 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 TMEM238LA0A1B0GVL6 79 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 A6NJY4 79 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 UBE2L6O14933 153 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 DEFB130BP0DP73 79 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 DEFB130AP0DP74 79 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 RNASE13Q5GAN3 156 aaKnown RBP12.47□□□□□ -0.41
GCDH-201ENST00000222214 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 FAM19A3Q7Z5A8 133 aa12.47□□□□□ -0.41
GCDH-201ENST00000222214 IGHV1-58A0A0C4DH39 117 aa12.46□□□□□ -0.41
GCDH-201ENST00000222214 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
GCDH-201ENST00000222214 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
GCDH-201ENST00000222214 TMEM101Q96IK0 257 aa12.46□□□□□ -0.41
GCDH-201ENST00000222214 NHP2Q9NX24 153 aaKnown RBP12.46□□□□□ -0.41
GCDH-201ENST00000222214 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
GCDH-201ENST00000222214 HERVK_113P63121 156 aa12.45□□□□□ -0.42
GCDH-201ENST00000222214 DEFB135Q30KP9 77 aa12.45□□□□□ -0.42
GCDH-201ENST00000222214 AMMECR1LQ6DCA0 310 aa12.45□□□□□ -0.42
GCDH-201ENST00000222214 TEP1Q99973 2627 aaKnown RBP12.45□□□□□ -0.42
GCDH-201ENST00000222214 MIFP14174 115 aa12.45□□□□□ -0.42
GCDH-201ENST00000222214 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
GCDH-201ENST00000222214 K7EP13 123 aa12.44□□□□□ -0.42
GCDH-201ENST00000222214 IGHV3-30-3P0DP02 117 aa12.44□□□□□ -0.42
GCDH-201ENST00000222214 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
GCDH-201ENST00000222214 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
GCDH-201ENST00000222214 A0A1B0GWB2 263 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 H3BUT2 72 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 CCL25O15444 150 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 KRTAP24-1Q3LI83 254 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 TRBV6-8A0A0A6YYG3 113 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 FAM222AQ5U5X8 452 aa12.43□□□□□ -0.42
GCDH-201ENST00000222214 ATRQ13535 2644 aa12.42□□□□□ -0.42
GCDH-201ENST00000222214 C12orf74Q32Q52 190 aa12.42□□□□□ -0.42
GCDH-201ENST00000222214 GTF2H5Q6ZYL4 71 aa12.42□□□□□ -0.42
GCDH-201ENST00000222214 VSIG2Q96IQ7 327 aa12.42□□□□□ -0.42
GCDH-201ENST00000222214 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
GCDH-201ENST00000222214 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
GCDH-201ENST00000222214 SHISA2Q6UWI4 295 aa12.41□□□□□ -0.42
GCDH-201ENST00000222214 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
GCDH-201ENST00000222214 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
GCDH-201ENST00000222214 A0A1W2PPM0 123 aa12.4□□□□□ -0.42
GCDH-201ENST00000222214 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
GCDH-201ENST00000222214 RNF183Q96D59 192 aa12.4□□□□□ -0.42
GCDH-201ENST00000222214 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 SAMD5Q5TGI4 173 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 C3orf56Q8N813 242 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 BAHCC1Q9P281 2608 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 K7ERJ3 54 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 FABP2P12104 132 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 ATP6V0E2Q8NHE4 81 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 CDKN2A-AS1Q9UH64 79 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 VWFP04275 2813 aa12.39□□□□□ -0.43
GCDH-201ENST00000222214 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 GYPEP15421 78 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 Q8NAQ8 132 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
GCDH-201ENST00000222214 DAD1P61803 113 aa12.37□□□□□ -0.43
GCDH-201ENST00000222214 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
GCDH-201ENST00000222214 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 K7EP34 96 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 TRAV13-1A0A0B4J241 112 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 A8MZ25 164 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 PAX4O43316 350 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
GCDH-201ENST00000222214 IGLV5-39A0A0G2JS06 123 aa12.35□□□□□ -0.43
GCDH-201ENST00000222214 IGLL5B9A064 214 aa12.35□□□□□ -0.43
GCDH-201ENST00000222214 COX6A2Q02221 97 aa12.35□□□□□ -0.43
GCDH-201ENST00000222214 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
GCDH-201ENST00000222214 ATP5G1P05496 136 aa12.34□□□□□ -0.43
GCDH-201ENST00000222214 GAGE6Q13070 117 aa12.34□□□□□ -0.43
GCDH-201ENST00000222214 RPL24P83731 157 aaKnown RBP12.34□□□□□ -0.43
GCDH-201ENST00000222214 NAA38Q9BRA0 125 aaKnown RBP12.34□□□□□ -0.43
GCDH-201ENST00000222214 SPCS1Q9Y6A9 102 aa12.34□□□□□ -0.43
GCDH-201ENST00000222214 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
GCDH-201ENST00000222214 NDUFA1O15239 70 aa12.32□□□□□ -0.44
GCDH-201ENST00000222214 TIMM17BO60830 172 aa12.32□□□□□ -0.44
GCDH-201ENST00000222214 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
GCDH-201ENST00000222214 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
GCDH-201ENST00000222214 TRAV26-1A0A087WT03 109 aa12.31□□□□□ -0.44
GCDH-201ENST00000222214 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
GCDH-201ENST00000222214 SMIM1B2RUZ4 78 aa12.31□□□□□ -0.44
GCDH-201ENST00000222214 DEFB4AO15263 64 aa12.31□□□□□ -0.44
GCDH-201ENST00000222214 LITAFQ99732 161 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms