RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C CCL1P37366 393 aa3.56□□□□□ -1.84
RPC40YPR110C MOH1P38191 138 aa3.56□□□□□ -1.84
RPC40YPR110C YBR138CP38277 524 aa3.56□□□□□ -1.84
RPC40YPR110C NPR3P38742 1146 aa3.56□□□□□ -1.84
RPC40YPR110C BDH2P39713 417 aa3.56□□□□□ -1.84
RPC40YPR110C SDS3P40505 327 aa3.56□□□□□ -1.84
RPC40YPR110C ERR3P42222 437 aa3.56□□□□□ -1.84
RPC40YPR110C CCT7P42943 550 aaKnown RBP3.56□□□□□ -1.84
RPC40YPR110C YML131WQ03102 365 aa3.56□□□□□ -1.84
RPC40YPR110C YMR206WQ03695 313 aa3.56□□□□□ -1.84
RPC40YPR110C VPS64Q03944 604 aa3.56□□□□□ -1.84
RPC40YPR110C TFC6Q06339 672 aa3.56□□□□□ -1.84
RPC40YPR110C UBC1P21734 215 aaKnown RBP3.55□□□□□ -1.84
RPC40YPR110C YPT10P38146 199 aa3.55□□□□□ -1.84
RPC40YPR110C FSH1P38777 243 aaKnown RBP3.55□□□□□ -1.84
RPC40YPR110C YJL206CP39529 758 aa3.55□□□□□ -1.84
RPC40YPR110C CAB2P40506 365 aa3.55□□□□□ -1.84
RPC40YPR110C BST1P43571 1029 aa3.55□□□□□ -1.84
RPC40YPR110C IDS2P46958 469 aa3.55□□□□□ -1.84
RPC40YPR110C MRPL13Q02204 264 aa3.55□□□□□ -1.84
RPC40YPR110C MFM1Q02783 413 aa3.55□□□□□ -1.84
RPC40YPR110C SVL3Q03088 825 aaKnown RBP3.55□□□□□ -1.84
RPC40YPR110C ARA2Q04212 335 aa3.55□□□□□ -1.84
RPC40YPR110C PNS1Q12412 539 aa3.55□□□□□ -1.84
RPC40YPR110C NKP1Q12493 238 aa3.55□□□□□ -1.84
RPC40YPR110C CTT1P06115 562 aa3.54□□□□□ -1.84
RPC40YPR110C ADE3P07245 946 aaKnown RBP3.54□□□□□ -1.84
RPC40YPR110C BET2P20133 325 aa3.54□□□□□ -1.84
RPC40YPR110C RIT1P23796 513 aa3.54□□□□□ -1.84
RPC40YPR110C CLB4P24871 460 aa3.54□□□□□ -1.84
RPC40YPR110C SWI4P25302 1093 aaKnown RBP3.54□□□□□ -1.84
RPC40YPR110C YCR061WP25639 631 aa3.54□□□□□ -1.84
RPC40YPR110C PRE2P30656 287 aaKnown RBP3.54□□□□□ -1.84
RPC40YPR110C ARP2P32381 391 aaKnown RBP3.54□□□□□ -1.84
RPC40YPR110C CDC5P32562 705 aa3.54□□□□□ -1.84
RPC40YPR110C BEM3P32873 1128 aa3.54□□□□□ -1.84
RPC40YPR110C YMC2P38087 329 aa3.54□□□□□ -1.84
RPC40YPR110C PSY4P38193 441 aa3.54□□□□□ -1.84
RPC40YPR110C SDH8P38345 138 aa3.54□□□□□ -1.84
RPC40YPR110C STB5P38699 743 aa3.54□□□□□ -1.84
RPC40YPR110C PIH1P38768 344 aa3.54□□□□□ -1.84
RPC40YPR110C MIT1P40002 666 aa3.54□□□□□ -1.84
RPC40YPR110C FAF1P40546 346 aaPredicted RBP3.54□□□□□ -1.84
RPC40YPR110C YIP4P53093 235 aa3.54□□□□□ -1.84
RPC40YPR110C NGL2Q03264 515 aaKnown RBP3.54□□□□□ -1.84
RPC40YPR110C YDR179W-AQ03983 463 aa3.54□□□□□ -1.84
RPC40YPR110C TMN2Q04562 672 aa3.54□□□□□ -1.84
RPC40YPR110C HOF1Q05080 669 aa3.54□□□□□ -1.84
RPC40YPR110C BUD21Q08492 214 aaPredicted RBP3.54□□□□□ -1.84
RPC40YPR110C TGS1Q12052 315 aa3.54□□□□□ -1.84
RPC40YPR110C SSM4P40318 1319 aa3.53□□□□□ -1.84
RPC40YPR110C NUC1P08466 329 aa3.53□□□□□ -1.84
RPC40YPR110C RPS7AP26786 190 aaKnown RBP3.53□□□□□ -1.84
RPC40YPR110C LOT5P34234 306 aa3.53□□□□□ -1.84
RPC40YPR110C NAB3P38996 802 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
RPC40YPR110C ARB1P40024 610 aaKnown RBP3.53□□□□□ -1.84
RPC40YPR110C RAD26P40352 1085 aa3.53□□□□□ -1.84
RPC40YPR110C IML2P47031 731 aa3.53□□□□□ -1.84
RPC40YPR110C BUD17P53727 317 aa3.53□□□□□ -1.84
RPC40YPR110C GTR1Q00582 310 aa3.53□□□□□ -1.84
RPC40YPR110C ATG21Q02887 496 aa3.53□□□□□ -1.84
RPC40YPR110C YDL073WQ07454 984 aa3.53□□□□□ -1.84
RPC40YPR110C YDL121CQ07541 149 aa3.53□□□□□ -1.84
RPC40YPR110C YPL216WQ08964 1102 aa3.53□□□□□ -1.84
RPC40YPR110C ICL2Q12031 575 aa3.53□□□□□ -1.84
RPC40YPR110C AAC1P04710 309 aa3.52□□□□□ -1.85
RPC40YPR110C CDC43P18898 376 aa3.52□□□□□ -1.85
RPC40YPR110C KGD2P19262 463 aaPredicted RBP3.52□□□□□ -1.85
RPC40YPR110C KIN3P22209 435 aa3.52□□□□□ -1.85
RPC40YPR110C DMC1P25453 334 aa3.52□□□□□ -1.85
RPC40YPR110C SSH4P32343 579 aa3.52□□□□□ -1.85
RPC40YPR110C MTH1P35198 433 aa3.52□□□□□ -1.85
RPC40YPR110C RRN3P36070 627 aa3.52□□□□□ -1.85
RPC40YPR110C MRPL36P36531 177 aa3.52□□□□□ -1.85
RPC40YPR110C SMK1P41808 388 aa3.52□□□□□ -1.85
RPC40YPR110C PMT6P42934 759 aa3.52□□□□□ -1.85
RPC40YPR110C BNA1P47096 177 aa3.52□□□□□ -1.85
RPC40YPR110C CTF18P49956 741 aa3.52□□□□□ -1.85
RPC40YPR110C SAP4P53036 818 aa3.52□□□□□ -1.85
RPC40YPR110C GND2P53319 492 aa3.52□□□□□ -1.85
RPC40YPR110C SPC98P53540 846 aa3.52□□□□□ -1.85
RPC40YPR110C CPR8P53728 308 aa3.52□□□□□ -1.85
RPC40YPR110C ESF2P53743 316 aaKnown RBP3.52□□□□□ -1.85
RPC40YPR110C YPL108WQ02872 168 aaPredicted RBP3.52□□□□□ -1.85
RPC40YPR110C OPY2Q06810 360 aa3.52□□□□□ -1.85
RPC40YPR110C IRC10Q08118 586 aa3.52□□□□□ -1.85
RPC40YPR110C SSP2Q08646 371 aa3.52□□□□□ -1.85
RPC40YPR110C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
RPC40YPR110C SUL2Q12325 893 aa3.52□□□□□ -1.85
RPC40YPR110C YBR255C-AQ3E776 120 aa3.52□□□□□ -1.85
RPC40YPR110C WHI2P12611 486 aa3.51□□□□□ -1.85
RPC40YPR110C PSF2P40359 213 aa3.51□□□□□ -1.85
RPC40YPR110C YGL117WP53133 265 aa3.51□□□□□ -1.85
RPC40YPR110C COQ6P53318 479 aa3.51□□□□□ -1.85
RPC40YPR110C YNL092WP53934 400 aa3.51□□□□□ -1.85
RPC40YPR110C TRS23Q03784 219 aa3.51□□□□□ -1.85
RPC40YPR110C MRH1Q12117 320 aaPredicted RBP3.51□□□□□ -1.85
RPC40YPR110C ZPS1Q12512 249 aa3.51□□□□□ -1.85
RPC40YPR110C CPA2P03965 1118 aaKnown RBP3.5□□□□□ -1.85
RPC40YPR110C SNF1P06782 633 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms