RNA–Protein interactions for RNA: YOR297C

TIM18, Transcript of Component of the mitochondrial TIM22 complex, yeast

Gene TIM18, Length 579 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM18	YOR297C	APM4	Q99186	491 aa		2.65	□□□□□ -1.99
TIM18	YOR297C	YPK1	P12688	680 aa	Known RBP	2.64	□□□□□ -1.99
TIM18	YOR297C	BET2	P20133	325 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	SFP1	P32432	683 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	VID28	P40547	921 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	YIR016W	P40572	265 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	SCW10	Q04951	389 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	GRS2	Q06817	618 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	HFI1	Q12060	488 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	ATX2	Q12067	313 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	UBX3	Q12229	455 aa		2.64	□□□□□ -1.99
TIM18	YOR297C	PNO1	Q99216	274 aa	Known RBP	2.64	□□□□□ -1.99
TIM18	YOR297C	PRP19	P32523	503 aa	Known RBP	2.63	□□□□□ -1.99
TIM18	YOR297C	DSS4	P32601	143 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	TOM71	P38825	639 aa	Known RBP	2.63	□□□□□ -1.99
TIM18	YOR297C	CIR1	P42940	261 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	PTA1	Q01329	785 aa	Predicted RBP	2.63	□□□□□ -1.99
TIM18	YOR297C	AAT1	Q01802	451 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	ECM9	Q02202	377 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	VTC3	Q02725	835 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	YHM2	Q04013	314 aa		2.63	□□□□□ -1.99
TIM18	YOR297C	ILS1	P09436	1072 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	SEC12	P11655	471 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	CDC26	P14724	124 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	DGR2	P32330	852 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	CDC5	P32562	705 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	RPT3	P33298	428 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	FTH1	P38310	465 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	RTT107	P38850	1070 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	RRP8	P38961	392 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	GZF3	P42944	551 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	SQS1	P53866	767 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	SNU56	Q03782	492 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	RAD33	Q04231	177 aa		2.62	□□□□□ -1.99
TIM18	YOR297C	YTH1	Q06102	208 aa	Predicted RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
TIM18	YOR297C	NOP14	Q99207	810 aa	Known RBP	2.62	□□□□□ -1.99
TIM18	YOR297C	PHO2	P07269	559 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	PCK1	P10963	549 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	RPL8A	P17076	256 aa	Known RBP	2.61	□□□□□ -1.99
TIM18	YOR297C	CBP3	P21560	335 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	MAK32	P23060	363 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	RMA1	P36001	430 aa	Known RBP	2.61	□□□□□ -1.99
TIM18	YOR297C	DID4	P36108	232 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	FAT1	P38225	669 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	IMD2	P38697	523 aa	Known RBP	2.61	□□□□□ -1.99
TIM18	YOR297C	RAD26	P40352	1085 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	LAS21	P40367	830 aa		2.61	□□□□□ -1.99
TIM18	YOR297C	IMD3	P50095	523 aa	Known RBP	2.61	□□□□□ -1.99
TIM18	YOR297C	AEP2	P22136	580 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	GND1	P38720	489 aa	Known RBP	2.6	□□□□□ -1.99
TIM18	YOR297C	MNN1	P39106	762 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	YIL152W	P40455	235 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	CIN1	P40987	1014 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	MNN11	P46985	422 aa	Known RBP	2.6	□□□□□ -1.99
TIM18	YOR297C	PEF1	P53238	335 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	YNL092W	P53934	400 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	DSE3	Q08729	430 aa		2.6	□□□□□ -1.99
TIM18	YOR297C	YTM1	Q12024	460 aa	Predicted RBP	2.6	□□□□□ -1.99
TIM18	YOR297C	YCR043C	P25361	127 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	GDA1	P32621	518 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	TYS1	P36421	394 aa	Known RBP	2.59	□□□□□ -1.99
TIM18	YOR297C	SCO2	P38072	301 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	SDH8	P38345	138 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	NOP2	P40991	618 aa	Known RBP	2.59	□□□□□ -1.99
TIM18	YOR297C	YGL260W	P53056	76 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	COG2	P53271	262 aa		2.59	□□□□□ -1.99
TIM18	YOR297C	MTQ2	Q03920	221 aa	Predicted RBP	2.59	□□□□□ -1.99
TIM18	YOR297C	GET3	Q12154	354 aa	Known RBP	2.59	□□□□□ -1.99
TIM18	YOR297C	CHO2	P05374	869 aa	Known RBP	2.58	□□□□□ -2
TIM18	YOR297C	PLC1	P32383	869 aa		2.58	□□□□□ -2
TIM18	YOR297C	KES1	P35844	434 aa	Known RBP	2.58	□□□□□ -2
TIM18	YOR297C	RRP14	P36080	434 aa	Known RBP	2.58	□□□□□ -2
TIM18	YOR297C	ARC40	P38328	384 aa	Known RBP	2.58	□□□□□ -2
TIM18	YOR297C	MAM1	P40065	302 aa		2.58	□□□□□ -2
TIM18	YOR297C	TES1	P41903	349 aa	Known RBP	2.58	□□□□□ -2
TIM18	YOR297C	NRT1	Q08485	598 aa		2.58	□□□□□ -2
TIM18	YOR297C	GAL4	P04386	881 aa		2.57	□□□□□ -2
TIM18	YOR297C	RPS21A	P0C0V8	87 aa	Known RBP	2.57	□□□□□ -2
TIM18	YOR297C	HLJ1	P48353	224 aa		2.57	□□□□□ -2
TIM18	YOR297C	THI73	Q07904	523 aa		2.57	□□□□□ -2
TIM18	YOR297C	MLH2	Q07980	695 aa		2.57	□□□□□ -2
TIM18	YOR297C	YOR389W	Q08912	624 aa		2.57	□□□□□ -2
TIM18	YOR297C	LYS21	Q12122	440 aa	Known RBP	2.57	□□□□□ -2
TIM18	YOR297C	CWH43	P25618	953 aa		2.56	□□□□□ -2
TIM18	YOR297C	SRP68	P38687	599 aa	Known RBP	2.56	□□□□□ -2
TIM18	YOR297C	MDR1	P53258	950 aa		2.56	□□□□□ -2
TIM18	YOR297C	FPR4	Q06205	392 aa	Predicted RBP	2.56	□□□□□ -2
TIM18	YOR297C	RRP43	P25359	394 aa	Predicted RBP	2.55	□□□□□ -2
TIM18	YOR297C	HXT4	P32467	576 aa		2.55	□□□□□ -2
TIM18	YOR297C	MET30	P39014	640 aa		2.55	□□□□□ -2
TIM18	YOR297C	VRG4	P40107	337 aa		2.55	□□□□□ -2
TIM18	YOR297C	YIL169C	P40442	995 aa		2.55	□□□□□ -2
TIM18	YOR297C	RNR4	P49723	345 aa	Known RBP	2.55	□□□□□ -2
TIM18	YOR297C	PLM2	Q04383	521 aa		2.55	□□□□□ -2
TIM18	YOR297C	UTP14	Q04500	899 aa	Known RBP	2.55	□□□□□ -2
TIM18	YOR297C	YMR034C	Q05131	434 aa	Predicted RBP	2.55	□□□□□ -2
TIM18	YOR297C	YLR281C	Q05863	155 aa		2.55	□□□□□ -2
TIM18	YOR297C	NGL1	Q08213	363 aa	Known RBP	2.55	□□□□□ -2
TIM18	YOR297C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms