RNA–Protein interactions for RNA: YOR038C

HIR2, Transcript of Subunit of HIR nucleosome assembly complex, yeast

Gene HIR2, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIR2	YOR038C	FUN30	P31380	1131 aa		5	□□□□□ -1.61
HIR2	YOR038C	ISF1	P32488	338 aa		5	□□□□□ -1.61
HIR2	YOR038C	MUD1	P32605	298 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	SPC29	P33419	253 aa		5	□□□□□ -1.61
HIR2	YOR038C	PTC3	P34221	468 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	MUD2	P36084	527 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	UIP5	P36137	443 aa		5	□□□□□ -1.61
HIR2	YOR038C	ECM4	P36156	370 aa		5	□□□□□ -1.61
HIR2	YOR038C	CCT7	P42943	550 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	IRC6	P43615	237 aa		5	□□□□□ -1.61
HIR2	YOR038C	STU2	P46675	888 aa		5	□□□□□ -1.61
HIR2	YOR038C	UPF3	P48412	387 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	BRE5	P53741	515 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	YNL144C	P53907	740 aa		5	□□□□□ -1.61
HIR2	YOR038C	ADA2	Q02336	434 aa		5	□□□□□ -1.61
HIR2	YOR038C	YPL034W	Q03083	165 aa		5	□□□□□ -1.61
HIR2	YOR038C	SKY1	Q03656	742 aa		5	□□□□□ -1.61
HIR2	YOR038C	MRL1	Q06815	381 aa		5	□□□□□ -1.61
HIR2	YOR038C	NOP6	Q07623	225 aa	Known RBP	5	□□□□□ -1.61
HIR2	YOR038C	YDL206W	Q12424	762 aa		5	□□□□□ -1.61
HIR2	YOR038C	SNF1	P06782	633 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	BAS1	P22035	811 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	MNE1	P24720	663 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	KIP1	P28742	1111 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	HIR2	P32480	875 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	MDL1	P33310	695 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	TRM2	P33753	639 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	MTH1	P35198	433 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	SET3	P36124	751 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	YHR054C	P38780	354 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	YIL161W	P40449	235 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	STR2	P47164	639 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	AZR1	P50080	613 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	RTC5	Q12108	567 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	RGR1	P19263	1082 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	NPP1	P25353	742 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	CYS3	P31373	394 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	HXT1	P32465	570 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	NIP1	P32497	812 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	RAD54	P32863	898 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	SHM1	P37292	490 aa	Predicted RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	PEX32	P38292	413 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	YLF2	P38746	405 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	LAM1	P38851	1228 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	KHA1	P40309	873 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	PKP1	P40530	394 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	MKT1	P40850	830 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	AVT1	P47082	602 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	LSC1	P53598	329 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
HIR2	YOR038C	TIM10	P87108	93 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	DOT1	Q04089	582 aa	Known RBP	4.99	□□□□□ -1.61
HIR2	YOR038C	ARR1	Q06596	294 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	YOL075C	Q08234	1294 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	PCD1	Q12524	340 aa		4.99	□□□□□ -1.61
HIR2	YOR038C	CHS2	P14180	963 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	MET8	P15807	274 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	DMC1	P25453	334 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	ARE1	P25628	610 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	CBF2	P32504	956 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	SMI1	P32566	505 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	NPL6	P32832	435 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	CCC2	P38995	1004 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	BUD16	P39988	312 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	NOP16	P40007	231 aa	Known RBP	4.98	□□□□□ -1.61
HIR2	YOR038C	SBE2	P42223	864 aa	Known RBP	4.98	□□□□□ -1.61
HIR2	YOR038C	ERG5	P54781	538 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	PEX25	Q02969	394 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	YML119W	Q03208	357 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	YDR338C	Q05497	695 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	YLR001C	Q07895	862 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	FMP25	Q08023	583 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	CIR2	Q08822	631 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	PAR32	Q12515	295 aa	Known RBP	4.98	□□□□□ -1.61
HIR2	YOR038C	AI4	P03878	556 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	LAT1	P12695	482 aa	Known RBP	4.98	□□□□□ -1.61
HIR2	YOR038C	MSH1	P25846	959 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	DUT1	P33317	147 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	MCM7	P38132	845 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	YHB1	P39676	399 aa	Known RBP	4.98	□□□□□ -1.61
HIR2	YOR038C	VPS38	Q05919	439 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	DAS2	Q12084	232 aa		4.98	□□□□□ -1.61
HIR2	YOR038C	THR1	P17423	357 aa	Known RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	SWH1	P35845	1188 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	YMC2	P38087	329 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	FAA3	P39002	694 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	KAP123	P40069	1113 aa	Known RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	SEC28	P40509	296 aa	Known RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	YJR115W	P47152	169 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	MSH6	Q03834	1242 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	PPM1	Q04081	328 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	UTP5	Q04177	643 aa	Known RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	UTP21	Q06078	939 aa	Predicted RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	MSS18	P08593	268 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	RPS6A	P0CX37	236 aa	Known RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	RPS6B	P0CX38	236 aa	Predicted RBP	4.97	□□□□□ -1.61
HIR2	YOR038C	CDC42	P19073	191 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	MIH1	P23748	554 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	AFR1	P33304	620 aa		4.97	□□□□□ -1.61
HIR2	YOR038C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms