RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W XDJ1P39102 459 aa12.18□□□□□ -0.46
CUE1YMR264W GTR1Q00582 310 aa12.18□□□□□ -0.46
CUE1YMR264W SLU7Q02775 382 aaKnown RBP12.18□□□□□ -0.46
CUE1YMR264W AAD15Q08361 143 aa12.18□□□□□ -0.46
CUE1YMR264W GID7P25569 745 aa12.17□□□□□ -0.46
CUE1YMR264W MVD1P32377 396 aaKnown RBP12.17□□□□□ -0.46
CUE1YMR264W UTR2P32623 467 aa12.17□□□□□ -0.46
CUE1YMR264W PPE1P38796 400 aa12.17□□□□□ -0.46
CUE1YMR264W PAN2P53010 1115 aaPredicted RBP12.17□□□□□ -0.46
CUE1YMR264W HST2P53686 357 aa12.17□□□□□ -0.46
CUE1YMR264W YNL035CP53962 389 aaKnown RBP12.17□□□□□ -0.46
CUE1YMR264W SPE3Q12074 293 aaKnown RBP12.17□□□□□ -0.46
CUE1YMR264W HOS1Q12214 470 aa12.17□□□□□ -0.46
CUE1YMR264W YPT6Q99260 215 aa12.17□□□□□ -0.46
CUE1YMR264W GAL11P19659 1081 aa12.16□□□□□ -0.46
CUE1YMR264W AMS1P22855 1083 aa12.16□□□□□ -0.46
CUE1YMR264W PEX5P35056 612 aa12.16□□□□□ -0.46
CUE1YMR264W FSH1P38777 243 aaKnown RBP12.16□□□□□ -0.46
CUE1YMR264W SSP120P39931 234 aaKnown RBP12.16□□□□□ -0.46
CUE1YMR264W YAT2P40017 923 aa12.16□□□□□ -0.46
CUE1YMR264W YJL107CP42947 387 aa12.16□□□□□ -0.46
CUE1YMR264W YFL012WP43580 148 aa12.16□□□□□ -0.46
CUE1YMR264W YGR035CP53222 116 aa12.16□□□□□ -0.46
CUE1YMR264W YPL109CQ02981 657 aa12.16□□□□□ -0.46
CUE1YMR264W SPG3Q04398 127 aaPredicted RBP12.16□□□□□ -0.46
CUE1YMR264W AIM32Q04689 311 aa12.16□□□□□ -0.46
CUE1YMR264W YSH1Q06224 779 aaPredicted RBP12.16□□□□□ -0.46
CUE1YMR264W SLP1Q12232 587 aa12.16□□□□□ -0.46
CUE1YMR264W ARP7Q12406 477 aa12.16□□□□□ -0.46
CUE1YMR264W SPE4Q12455 300 aa12.16□□□□□ -0.46
CUE1YMR264W MET16P18408 261 aaPredicted RBP12.15□□□□□ -0.46
CUE1YMR264W RGR1P19263 1082 aa12.15□□□□□ -0.46
CUE1YMR264W RPC19P28000 142 aaKnown RBP12.15□□□□□ -0.46
CUE1YMR264W OXP1P28273 1286 aa12.15□□□□□ -0.46
CUE1YMR264W MCM5P29496 775 aaKnown RBP12.15□□□□□ -0.46
CUE1YMR264W PMI40P29952 429 aaKnown RBP12.15□□□□□ -0.46
CUE1YMR264W LDH1P38139 375 aa12.15□□□□□ -0.46
CUE1YMR264W YHR202WP38887 602 aa12.15□□□□□ -0.46
CUE1YMR264W YJL206CP39529 758 aa12.15□□□□□ -0.46
CUE1YMR264W TGL3P40308 642 aa12.15□□□□□ -0.46
CUE1YMR264W ATM1P40416 690 aa12.15□□□□□ -0.46
CUE1YMR264W ALR1Q08269 859 aa12.15□□□□□ -0.46
CUE1YMR264W RAD3P06839 778 aa12.14□□□□□ -0.47
CUE1YMR264W YIH1P25637 258 aa12.14□□□□□ -0.47
CUE1YMR264W MET4P32389 672 aa12.14□□□□□ -0.47
CUE1YMR264W HSP78P33416 811 aa12.14□□□□□ -0.47
CUE1YMR264W YBR284WP38150 797 aa12.14□□□□□ -0.47
CUE1YMR264W SLX1P38324 304 aa12.14□□□□□ -0.47
CUE1YMR264W BRL1P38770 471 aa12.14□□□□□ -0.47
CUE1YMR264W ERP5P38819 212 aa12.14□□□□□ -0.47
CUE1YMR264W LAM1P38851 1228 aa12.14□□□□□ -0.47
CUE1YMR264W SPO74P45819 413 aa12.14□□□□□ -0.47
CUE1YMR264W HRT3Q12347 344 aa12.14□□□□□ -0.47
CUE1YMR264W CCP1P00431 361 aa12.13□□□□□ -0.47
CUE1YMR264W ARD1P07347 238 aaPredicted RBP12.13□□□□□ -0.47
CUE1YMR264W RNA1P11745 407 aaKnown RBP12.13□□□□□ -0.47
CUE1YMR264W KGD2P19262 463 aaPredicted RBP12.13□□□□□ -0.47
CUE1YMR264W TOA1P32773 286 aa12.13□□□□□ -0.47
CUE1YMR264W HMT1P38074 348 aa12.13□□□□□ -0.47
CUE1YMR264W YBR056WP38081 501 aa12.13□□□□□ -0.47
CUE1YMR264W FHL1P39521 936 aa12.13□□□□□ -0.47
CUE1YMR264W YEL028WP39989 153 aa12.13□□□□□ -0.47
CUE1YMR264W PEP8P40335 379 aa12.13□□□□□ -0.47
CUE1YMR264W DPH1P40487 425 aaKnown RBP12.13□□□□□ -0.47
CUE1YMR264W RPS10BP46784 105 aaKnown RBP12.13□□□□□ -0.47
CUE1YMR264W YJL132WP47014 750 aa12.13□□□□□ -0.47
CUE1YMR264W ARA2Q04212 335 aa12.13□□□□□ -0.47
CUE1YMR264W YLR177WQ06251 628 aa12.13□□□□□ -0.47
CUE1YMR264W RPS10AQ08745 105 aaPredicted RBP12.13□□□□□ -0.47
CUE1YMR264W YCL068CP25593 260 aa12.12□□□□□ -0.47
CUE1YMR264W HEM3P28789 327 aa12.12□□□□□ -0.47
CUE1YMR264W CYM1P32898 989 aa12.12□□□□□ -0.47
CUE1YMR264W RRP14P36080 434 aaKnown RBP12.12□□□□□ -0.47
CUE1YMR264W RFC3P38629 340 aa12.12□□□□□ -0.47
CUE1YMR264W YEL023CP39992 682 aa12.12□□□□□ -0.47
CUE1YMR264W CNN1P43618 361 aa12.12□□□□□ -0.47
CUE1YMR264W FAR3P46671 204 aa12.12□□□□□ -0.47
CUE1YMR264W YNL144CP53907 740 aa12.12□□□□□ -0.47
CUE1YMR264W MTD1Q02046 320 aaKnown RBP12.12□□□□□ -0.47
CUE1YMR264W ARP9Q05123 467 aa12.12□□□□□ -0.47
CUE1YMR264W ADY3Q07732 790 aa12.12□□□□□ -0.47
CUE1YMR264W SAM3Q08986 587 aa12.12□□□□□ -0.47
CUE1YMR264W LDB17Q12342 491 aa12.12□□□□□ -0.47
CUE1YMR264W APM4Q99186 491 aa12.12□□□□□ -0.47
CUE1YMR264W UBR2Q07963 1872 aa12.12□□□□□ -0.47
CUE1YMR264W TOM1Q03280 3268 aa12.12□□□□□ -0.47
CUE1YMR264W HSP60P19882 572 aaKnown RBP12.11□□□□□ -0.47
CUE1YMR264W ADY2P25613 283 aa12.11□□□□□ -0.47
CUE1YMR264W ADK2P26364 225 aa12.11□□□□□ -0.47
CUE1YMR264W NDI1P32340 513 aa12.11□□□□□ -0.47
CUE1YMR264W HEM12P32347 362 aaPredicted RBP12.11□□□□□ -0.47
CUE1YMR264W DSS4P32601 143 aa12.11□□□□□ -0.47
CUE1YMR264W STE13P33894 931 aa12.11□□□□□ -0.47
CUE1YMR264W FIR1P40020 876 aa12.11□□□□□ -0.47
CUE1YMR264W TAF1P46677 1066 aa12.11□□□□□ -0.47
CUE1YMR264W NUT1P53114 1132 aa12.11□□□□□ -0.47
CUE1YMR264W NNF2P53253 936 aa12.11□□□□□ -0.47
CUE1YMR264W GRX8Q05926 109 aa12.11□□□□□ -0.47
CUE1YMR264W LEA1Q08963 238 aaPredicted RBP12.11□□□□□ -0.47
CUE1YMR264W PUF2Q12221 1075 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms