RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C THI73Q07904 523 aa2.79□□□□□ -1.96
VTI1YMR197C BUD21Q08492 214 aaPredicted RBP2.79□□□□□ -1.96
VTI1YMR197C APM4Q99186 491 aa2.79□□□□□ -1.96
VTI1YMR197C TUF1P02992 437 aaKnown RBP2.78□□□□□ -1.96
VTI1YMR197C AAC1P04710 309 aa2.78□□□□□ -1.96
VTI1YMR197C YER190C-BP0CX94 160 aa2.78□□□□□ -1.96
VTI1YMR197C YEL077W-AP0CX95 160 aa2.78□□□□□ -1.96
VTI1YMR197C YGR296C-BP0CX96 160 aa2.78□□□□□ -1.96
VTI1YMR197C YPL283W-BP0CX97 160 aa2.78□□□□□ -1.96
VTI1YMR197C YPR204C-AP0CX98 160 aa2.78□□□□□ -1.96
VTI1YMR197C YPK1P12688 680 aaKnown RBP2.78□□□□□ -1.96
VTI1YMR197C MGM1P32266 881 aa2.78□□□□□ -1.96
VTI1YMR197C TPM2P40414 161 aa2.78□□□□□ -1.96
VTI1YMR197C ENP2P48234 707 aaKnown RBP2.78□□□□□ -1.96
VTI1YMR197C COP1P53622 1201 aaKnown RBP2.78□□□□□ -1.96
VTI1YMR197C MRPL1Q04599 285 aa2.78□□□□□ -1.96
VTI1YMR197C CYK3Q07533 885 aa2.78□□□□□ -1.96
VTI1YMR197C YOL057WQ08225 711 aa2.78□□□□□ -1.96
VTI1YMR197C PCK1P10963 549 aa2.77□□□□□ -1.97
VTI1YMR197C DGR2P32330 852 aa2.77□□□□□ -1.97
VTI1YMR197C GCS1P35197 352 aa2.77□□□□□ -1.97
VTI1YMR197C RMA1P36001 430 aaKnown RBP2.77□□□□□ -1.97
VTI1YMR197C OAF1P39720 1047 aaPredicted RBP2.77□□□□□ -1.97
VTI1YMR197C CFD1P40558 293 aa2.77□□□□□ -1.97
VTI1YMR197C MAF1P41910 395 aa2.77□□□□□ -1.97
VTI1YMR197C IRC7P43623 340 aa2.77□□□□□ -1.97
VTI1YMR197C YJR142WP47173 342 aa2.77□□□□□ -1.97
VTI1YMR197C SQS1P53866 767 aaKnown RBP2.77□□□□□ -1.97
VTI1YMR197C DNM1P54861 757 aa2.77□□□□□ -1.97
VTI1YMR197C BET2P20133 325 aa2.76□□□□□ -1.97
VTI1YMR197C COQ3P27680 312 aa2.76□□□□□ -1.97
VTI1YMR197C HXT4P32467 576 aa2.76□□□□□ -1.97
VTI1YMR197C DSS4P32601 143 aa2.76□□□□□ -1.97
VTI1YMR197C DID4P36108 232 aa2.76□□□□□ -1.97
VTI1YMR197C GRX7P38068 203 aa2.76□□□□□ -1.97
VTI1YMR197C FLO5P38894 1075 aa2.76□□□□□ -1.97
VTI1YMR197C MNN11P46985 422 aaKnown RBP2.76□□□□□ -1.97
VTI1YMR197C CRT10Q08226 957 aa2.76□□□□□ -1.97
VTI1YMR197C YTM1Q12024 460 aaPredicted RBP2.76□□□□□ -1.97
VTI1YMR197C PNO1Q99216 274 aaKnown RBP2.76□□□□□ -1.97
VTI1YMR197C YCP4P25349 247 aaKnown RBP2.75□□□□□ -1.97
VTI1YMR197C GDA1P32621 518 aa2.75□□□□□ -1.97
VTI1YMR197C UBP12P39538 1254 aa2.75□□□□□ -1.97
VTI1YMR197C YEN1P40028 759 aa2.75□□□□□ -1.97
VTI1YMR197C RPL15BP54780 204 aaPredicted RBP2.75□□□□□ -1.97
VTI1YMR197C RAD33Q04231 177 aa2.75□□□□□ -1.97
VTI1YMR197C SNA4Q07549 140 aa2.75□□□□□ -1.97
VTI1YMR197C BUD7Q08754 746 aa2.75□□□□□ -1.97
VTI1YMR197C YEL076C-AP0CX16 216 aa2.74□□□□□ -1.97
VTI1YMR197C YLR464WP0CX17 216 aa2.74□□□□□ -1.97
VTI1YMR197C SEC12P11655 471 aa2.74□□□□□ -1.97
VTI1YMR197C CDC5P32562 705 aa2.74□□□□□ -1.97
VTI1YMR197C ATO2P32907 282 aa2.74□□□□□ -1.97
VTI1YMR197C CCT4P39078 528 aaKnown RBP2.74□□□□□ -1.97
VTI1YMR197C YEL076CP39971 216 aa2.74□□□□□ -1.97
VTI1YMR197C LYS20P48570 428 aaKnown RBP2.74□□□□□ -1.97
VTI1YMR197C PEF1P53238 335 aa2.74□□□□□ -1.97
VTI1YMR197C YNL092WP53934 400 aa2.74□□□□□ -1.97
VTI1YMR197C UME1Q03010 460 aa2.74□□□□□ -1.97
VTI1YMR197C SNU56Q03782 492 aaKnown RBP2.74□□□□□ -1.97
VTI1YMR197C NGL1Q08213 363 aaKnown RBP2.74□□□□□ -1.97
VTI1YMR197C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
VTI1YMR197C NUP145P49687 1317 aa2.73□□□□□ -1.97
VTI1YMR197C YPT1P01123 206 aaKnown RBP2.73□□□□□ -1.97
VTI1YMR197C AEP2P22136 580 aa2.73□□□□□ -1.97
VTI1YMR197C FTH1P38310 465 aa2.73□□□□□ -1.97
VTI1YMR197C IMD2P38697 523 aaKnown RBP2.73□□□□□ -1.97
VTI1YMR197C YAT2P40017 923 aa2.73□□□□□ -1.97
VTI1YMR197C RNR4P49723 345 aaKnown RBP2.73□□□□□ -1.97
VTI1YMR197C IMD3P50095 523 aaKnown RBP2.73□□□□□ -1.97
VTI1YMR197C GIS2P53849 153 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
VTI1YMR197C SRL1Q08673 210 aa2.73□□□□□ -1.97
VTI1YMR197C CET1O13297 549 aaPredicted RBP2.72□□□□□ -1.97
VTI1YMR197C KAR1P11927 433 aa2.72□□□□□ -1.97
VTI1YMR197C AIM17P23180 465 aaKnown RBP2.72□□□□□ -1.97
VTI1YMR197C MRC1P25588 1096 aa2.72□□□□□ -1.97
VTI1YMR197C RPT3P33298 428 aaKnown RBP2.72□□□□□ -1.97
VTI1YMR197C SER1P33330 395 aaKnown RBP2.72□□□□□ -1.97
VTI1YMR197C SDH8P38345 138 aa2.72□□□□□ -1.97
VTI1YMR197C YIR016WP40572 265 aa2.72□□□□□ -1.97
VTI1YMR197C MDV1P47025 714 aa2.72□□□□□ -1.97
VTI1YMR197C GPG1P53130 126 aa2.72□□□□□ -1.97
VTI1YMR197C MDR1P53258 950 aa2.72□□□□□ -1.97
VTI1YMR197C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
VTI1YMR197C ATP12P22135 325 aa2.71□□□□□ -1.98
VTI1YMR197C MAK32P23060 363 aa2.71□□□□□ -1.98
VTI1YMR197C ENP1P38333 483 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C GND1P38720 489 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C MTG2P38860 518 aa2.71□□□□□ -1.98
VTI1YMR197C CIN1P40987 1014 aa2.71□□□□□ -1.98
VTI1YMR197C GPP1P41277 250 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C PMT3P47190 753 aa2.71□□□□□ -1.98
VTI1YMR197C COG2P53271 262 aa2.71□□□□□ -1.98
VTI1YMR197C MTD1Q02046 320 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C YML119WQ03208 357 aa2.71□□□□□ -1.98
VTI1YMR197C ECM16Q04217 1267 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C VMS1Q04311 632 aaKnown RBP2.71□□□□□ -1.98
VTI1YMR197C YDL121CQ07541 149 aa2.71□□□□□ -1.98
VTI1YMR197C NDD1Q08887 554 aa2.71□□□□□ -1.98
VTI1YMR197C RTC1Q08281 1341 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms