RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	CEF1	Q03654	590 aa	Predicted RBP	3.95	□□□□□ -1.78
CST9	YLR394W	HIM1	Q06674	414 aa		3.95	□□□□□ -1.78
CST9	YLR394W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
CST9	YLR394W	RRP6	Q12149	733 aa	Known RBP	3.95	□□□□□ -1.78
CST9	YLR394W	NYV1	Q12255	253 aa		3.95	□□□□□ -1.78
CST9	YLR394W	STE12	P13574	688 aa		3.94	□□□□□ -1.78
CST9	YLR394W	YEF3	P16521	1044 aa	Known RBP	3.94	□□□□□ -1.78
CST9	YLR394W	CAP1	P28495	268 aa	Known RBP	3.94	□□□□□ -1.78
CST9	YLR394W	YGL117W	P53133	265 aa		3.94	□□□□□ -1.78
CST9	YLR394W	ENT2	Q05785	613 aa		3.94	□□□□□ -1.78
CST9	YLR394W	TCB3	Q03640	1545 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	RPN13	O13563	156 aa		3.93	□□□□□ -1.78
CST9	YLR394W	PRE2	P30656	287 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	FRD1	P32614	470 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	DHR2	P36009	735 aa	Predicted RBP	3.93	□□□□□ -1.78
CST9	YLR394W	RPT2	P40327	437 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	NOP2	P40991	618 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	POL31	P46957	487 aa		3.93	□□□□□ -1.78
CST9	YLR394W	YNL092W	P53934	400 aa		3.93	□□□□□ -1.78
CST9	YLR394W	DAK1	P54838	584 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	NGL2	Q03264	515 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	TRS31	Q03337	283 aa		3.93	□□□□□ -1.78
CST9	YLR394W	CIA1	Q05583	330 aa		3.93	□□□□□ -1.78
CST9	YLR394W	MRI1	Q06489	411 aa	Known RBP	3.93	□□□□□ -1.78
CST9	YLR394W	SEC18	P18759	758 aa	Known RBP	3.92	□□□□□ -1.78
CST9	YLR394W	MUP3	P38734	546 aa		3.92	□□□□□ -1.78
CST9	YLR394W	YLF2	P38746	405 aa		3.92	□□□□□ -1.78
CST9	YLR394W	PMC1	P38929	1173 aa	Predicted RBP	3.92	□□□□□ -1.78
CST9	YLR394W	STT3	P39007	718 aa	Known RBP	3.92	□□□□□ -1.78
CST9	YLR394W	SAP4	P53036	818 aa		3.92	□□□□□ -1.78
CST9	YLR394W	RTS3	P53289	263 aa		3.92	□□□□□ -1.78
CST9	YLR394W	UBX4	P54730	416 aa		3.92	□□□□□ -1.78
CST9	YLR394W	ARG7	Q04728	441 aa		3.92	□□□□□ -1.78
CST9	YLR394W	EIS1	Q05050	843 aa	Known RBP	3.92	□□□□□ -1.78
CST9	YLR394W	AAD4	Q07747	329 aa		3.92	□□□□□ -1.78
CST9	YLR394W	MDM20	Q12387	796 aa	Known RBP	3.92	□□□□□ -1.78
CST9	YLR394W	TPK2	P06245	380 aa		3.91	□□□□□ -1.78
CST9	YLR394W	PGI1	P12709	554 aa	Known RBP	3.91	□□□□□ -1.78
CST9	YLR394W	YMC1	P32331	307 aa		3.91	□□□□□ -1.78
CST9	YLR394W	ORC2	P32833	620 aa		3.91	□□□□□ -1.78
CST9	YLR394W	CCL1	P37366	393 aa		3.91	□□□□□ -1.78
CST9	YLR394W	APM3	P38153	483 aa		3.91	□□□□□ -1.78
CST9	YLR394W	CPR8	P53728	308 aa		3.91	□□□□□ -1.78
CST9	YLR394W	ICL2	Q12031	575 aa		3.91	□□□□□ -1.78
CST9	YLR394W	SEC12	P11655	471 aa		3.9	□□□□□ -1.78
CST9	YLR394W	SIR1	P21691	654 aa		3.9	□□□□□ -1.78
CST9	YLR394W	SWI4	P25302	1093 aa	Known RBP	3.9	□□□□□ -1.78
CST9	YLR394W	RPS7A	P26786	190 aa	Known RBP	3.9	□□□□□ -1.78
CST9	YLR394W	CDC5	P32562	705 aa		3.9	□□□□□ -1.78
CST9	YLR394W	PAC2	P39937	518 aa		3.9	□□□□□ -1.78
CST9	YLR394W	ARB1	P40024	610 aa	Known RBP	3.9	□□□□□ -1.78
CST9	YLR394W	IES5	P40060	125 aa		3.9	□□□□□ -1.78
CST9	YLR394W	THI6	P41835	540 aa		3.9	□□□□□ -1.78
CST9	YLR394W	YPL216W	Q08964	1102 aa		3.9	□□□□□ -1.78
CST9	YLR394W	Q0010	Q9ZZX9	128 aa		3.9	□□□□□ -1.78
CST9	YLR394W	CPA2	P03965	1118 aa	Known RBP	3.89	□□□□□ -1.79
CST9	YLR394W	YPK1	P12688	680 aa	Known RBP	3.89	□□□□□ -1.79
CST9	YLR394W	TAF5	P38129	798 aa		3.89	□□□□□ -1.79
CST9	YLR394W	YBR138C	P38277	524 aa		3.89	□□□□□ -1.79
CST9	YLR394W	RIM4	P38741	713 aa		3.89	□□□□□ -1.79
CST9	YLR394W	VPS8	P39702	1274 aa		3.89	□□□□□ -1.79
CST9	YLR394W	ACA1	P39970	489 aa		3.89	□□□□□ -1.79
CST9	YLR394W	VFA1	P40080	203 aa		3.89	□□□□□ -1.79
CST9	YLR394W	COQ6	P53318	479 aa		3.89	□□□□□ -1.79
CST9	YLR394W	CRD1	Q07560	283 aa		3.89	□□□□□ -1.79
CST9	YLR394W	PCL8	Q08966	492 aa		3.89	□□□□□ -1.79
CST9	YLR394W	ZPS1	Q12512	249 aa		3.89	□□□□□ -1.79
CST9	YLR394W	BET2	P20133	325 aa		3.88	□□□□□ -1.79
CST9	YLR394W	RNR3	P21672	869 aa	Known RBP	3.88	□□□□□ -1.79
CST9	YLR394W	VPS34	P22543	875 aa		3.88	□□□□□ -1.79
CST9	YLR394W	MCM3	P24279	971 aa	Known RBP	3.88	□□□□□ -1.79
CST9	YLR394W	SAT4	P25333	603 aa	Known RBP	3.88	□□□□□ -1.79
CST9	YLR394W	SDH8	P38345	138 aa		3.88	□□□□□ -1.79
CST9	YLR394W	PIH1	P38768	344 aa		3.88	□□□□□ -1.79
CST9	YLR394W	MRK1	P50873	501 aa		3.88	□□□□□ -1.79
CST9	YLR394W	YML119W	Q03208	357 aa		3.88	□□□□□ -1.79
CST9	YLR394W	OSW1	Q08692	278 aa		3.88	□□□□□ -1.79
CST9	YLR394W	PMA2	P19657	947 aa		3.87	□□□□□ -1.79
CST9	YLR394W	YCR061W	P25639	631 aa		3.87	□□□□□ -1.79
CST9	YLR394W	MSH1	P25846	959 aa		3.87	□□□□□ -1.79
CST9	YLR394W	ARO9	P38840	513 aa	Predicted RBP	3.87	□□□□□ -1.79
CST9	YLR394W	ERR3	P42222	437 aa		3.87	□□□□□ -1.79
CST9	YLR394W	GAT1	P43574	510 aa		3.87	□□□□□ -1.79
CST9	YLR394W	YFL015C	P43578	164 aa		3.87	□□□□□ -1.79
CST9	YLR394W	SCS3	P53012	380 aa		3.87	□□□□□ -1.79
CST9	YLR394W	CPR6	P53691	371 aa	Known RBP	3.87	□□□□□ -1.79
CST9	YLR394W	AIM6	Q07716	390 aa		3.87	□□□□□ -1.79
CST9	YLR394W	ADE3	P07245	946 aa	Known RBP	3.87	□□□□□ -1.79
CST9	YLR394W	WHI2	P12611	486 aa		3.87	□□□□□ -1.79
CST9	YLR394W	HOM2	P13663	365 aa	Known RBP	3.87	□□□□□ -1.79
CST9	YLR394W	POL3	P15436	1097 aa		3.87	□□□□□ -1.79
CST9	YLR394W	NCP1	P16603	691 aa	Known RBP	3.87	□□□□□ -1.79
CST9	YLR394W	AMD2	P22580	549 aa		3.87	□□□□□ -1.79
CST9	YLR394W	AAD3	P25612	363 aa		3.87	□□□□□ -1.79
CST9	YLR394W	DBF20	P32328	564 aa		3.87	□□□□□ -1.79
CST9	YLR394W	UGP1	P32861	499 aa	Known RBP	3.87	□□□□□ -1.79
CST9	YLR394W	PUG1	P40100	303 aa		3.87	□□□□□ -1.79
CST9	YLR394W	IDS2	P46958	469 aa		3.87	□□□□□ -1.79
CST9	YLR394W	YDL073W	Q07454	984 aa		3.87	□□□□□ -1.79
CST9	YLR394W	TGS1	Q12052	315 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms