RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	MET22	P32179	357 aa		15.98	■□□□□ 0.15
CCC1	YLR220W	RAD5	P32849	1169 aa	Predicted RBP	15.98	■□□□□ 0.15
CCC1	YLR220W	KAP104	P38217	918 aa	Known RBP	15.98	■□□□□ 0.15
CCC1	YLR220W	YEL028W	P39989	153 aa		15.98	■□□□□ 0.15
CCC1	YLR220W	TOF2	Q02208	771 aa		15.98	■□□□□ 0.15
CCC1	YLR220W	CDC24	P11433	854 aa	Predicted RBP	15.97	■□□□□ 0.15
CCC1	YLR220W	RAM1	P22007	431 aa		15.97	■□□□□ 0.15
CCC1	YLR220W	PSE1	P32337	1089 aa	Known RBP	15.97	■□□□□ 0.15
CCC1	YLR220W	SGE1	P33335	543 aa		15.97	■□□□□ 0.15
CCC1	YLR220W	PPE1	P38796	400 aa		15.97	■□□□□ 0.15
CCC1	YLR220W	YGR127W	P53275	312 aa		15.97	■□□□□ 0.15
CCC1	YLR220W	TRM112	P53738	135 aa	Predicted RBP	15.97	■□□□□ 0.15
CCC1	YLR220W	SEY1	Q99287	776 aa		15.97	■□□□□ 0.15
CCC1	YLR220W	GCR1	P07261	785 aa		15.96	■□□□□ 0.15
CCC1	YLR220W	PLC1	P32383	869 aa		15.96	■□□□□ 0.15
CCC1	YLR220W	URA8	P38627	578 aa	Predicted RBP	15.96	■□□□□ 0.15
CCC1	YLR220W	RSM26	P47141	266 aa		15.96	■□□□□ 0.15
CCC1	YLR220W	NMA111	P53920	997 aa		15.96	■□□□□ 0.15
CCC1	YLR220W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	15.96	■□□□□ 0.15	not detected
CCC1	YLR220W	ACM1	Q08981	209 aa		15.96	■□□□□ 0.15
CCC1	YLR220W	KEX2	P13134	814 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	NFU1	P32860	256 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	CKB2	P38930	258 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	VAC8	P39968	578 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	ATM1	P40416	690 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	EMW1	P42842	904 aa	Known RBP	15.95	■□□□□ 0.14
CCC1	YLR220W	BST1	P43571	1029 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	CNN1	P43618	361 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	RPS10B	P46784	105 aa	Known RBP	15.95	■□□□□ 0.14
CCC1	YLR220W	YPR003C	P53394	754 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	CDC73	Q06697	393 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	NRT1	Q08485	598 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	RPS10A	Q08745	105 aa	Predicted RBP	15.95	■□□□□ 0.14
CCC1	YLR220W	RAD59	Q12223	238 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	AI5_ALPHA	Q9ZZX1	630 aa		15.95	■□□□□ 0.14
CCC1	YLR220W	REV1	P12689	985 aa		15.94	■□□□□ 0.14
CCC1	YLR220W	GPI10	P30777	616 aa		15.94	■□□□□ 0.14
CCC1	YLR220W	RDH54	P38086	958 aa		15.94	■□□□□ 0.14
CCC1	YLR220W	POL12	P38121	705 aa	Predicted RBP	15.94	■□□□□ 0.14
CCC1	YLR220W	KTR4	P38131	464 aa		15.94	■□□□□ 0.14
CCC1	YLR220W	DLD2	P46681	530 aa	Known RBP	15.94	■□□□□ 0.14
CCC1	YLR220W	PRP24	P49960	444 aa	Known RBP	15.94	■□□□□ 0.14
CCC1	YLR220W	SEG1	Q04279	960 aa		15.94	■□□□□ 0.14
CCC1	YLR220W	PDH1	Q12428	516 aa	Known RBP	15.94	■□□□□ 0.14
CCC1	YLR220W	IMA3	P0CW40	589 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	IMA4	P0CW41	589 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	CBF1	P17106	351 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	BET2	P20133	325 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	OTU2	P38747	307 aa	Known RBP	15.93	■□□□□ 0.14
CCC1	YLR220W	MIC19	P43594	170 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	TAN1	P53072	289 aa	Predicted RBP	15.93	■□□□□ 0.14
CCC1	YLR220W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	15.93	■□□□□ 0.14	not detected
CCC1	YLR220W	RPN4	Q03465	531 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	IMA2	Q08295	589 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	AAD15	Q08361	143 aa		15.93	■□□□□ 0.14
CCC1	YLR220W	YMR084W	A2P2R3	262 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	SPO16	P17122	198 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	TSR4	P25040	408 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	PPZ1	P26570	692 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	COY1	P34237	679 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	YAT2	P40017	923 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	IML2	P47031	731 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	ADI1	Q03677	179 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	TMN2	Q04562	672 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	SWC7	Q06707	132 aa		15.92	■□□□□ 0.14
CCC1	YLR220W	QCR6	P00127	147 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	SIR1	P21691	654 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	IMG2	P25642	146 aa	Predicted RBP	15.91	■□□□□ 0.14
CCC1	YLR220W	PAT1	P25644	796 aa	Known RBP	15.91	■□□□□ 0.14
CCC1	YLR220W	YKL097C	P34245	136 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	SPP381	P38282	291 aa	Predicted RBP	15.91	■□□□□ 0.14
CCC1	YLR220W	MSR1	P38714	643 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	HEM14	P40012	539 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	INA22	P40576	216 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	RRN7	P40992	514 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	YMR206W	Q03695	313 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	ENT5	Q03769	411 aa	Known RBP	15.91	■□□□□ 0.14
CCC1	YLR220W	NDD1	Q08887	554 aa		15.91	■□□□□ 0.14
CCC1	YLR220W	MGT1	P26188	188 aa		15.9	■□□□□ 0.14
CCC1	YLR220W	PMI40	P29952	429 aa	Known RBP	15.9	■□□□□ 0.14
CCC1	YLR220W	PTC3	P34221	468 aa	Known RBP	15.9	■□□□□ 0.14
CCC1	YLR220W	YCS4	Q06156	1176 aa		15.9	■□□□□ 0.14
CCC1	YLR220W	AFI1	Q99222	893 aa		15.9	■□□□□ 0.14
CCC1	YLR220W	TPS2	P31688	896 aa	Known RBP	15.89	■□□□□ 0.13
CCC1	YLR220W	KAR9	P32526	644 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	GGA2	P38817	585 aa	Known RBP	15.89	■□□□□ 0.13
CCC1	YLR220W	SCC4	P40090	624 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	YJR039W	P47107	1121 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	ARP9	Q05123	467 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	FLC1	Q08967	793 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	CCH1	P50077	2039 aa		15.89	■□□□□ 0.13
CCC1	YLR220W	HEM15	P16622	393 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	KIN3	P22209	435 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	UTR2	P32623	467 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	SRP101	P32916	621 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	EXO1	P39875	702 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	SAE2	P46946	345 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	ATG36	P46983	293 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	PCL10	P53124	433 aa		15.88	■□□□□ 0.13
CCC1	YLR220W	ADD66	P36040	267 aa		15.87	■□□□□ 0.13

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