RNA–Protein interactions for RNA: YJL096W

MRPL49, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL49, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL49	YJL096W	SPC72	P39723	622 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	YIL092W	P40497	633 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	IRC8	P47046	822 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	COG8	Q04632	607 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	EIS1	Q05050	843 aa	Known RBP	4.22	□□□□□ -1.73
MRPL49	YJL096W	IZH3	Q07959	543 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	CWC2	Q12046	339 aa	Predicted RBP	4.22	□□□□□ -1.73
MRPL49	YJL096W	DCS2	Q12123	353 aa		4.22	□□□□□ -1.73
MRPL49	YJL096W	CDC31	P06704	161 aa	Known RBP	4.21	□□□□□ -1.74
MRPL49	YJL096W	HSC82	P15108	705 aa	Known RBP	4.21	□□□□□ -1.74
MRPL49	YJL096W	STE4	P18851	423 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	MSH1	P25846	959 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	JNM1	P36224	373 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	AKL1	P38080	1108 aa	Known RBP	4.21	□□□□□ -1.74
MRPL49	YJL096W	VPS8	P39702	1274 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	ASK10	P48361	1146 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	RSC1	P53236	928 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	ATP23	P53722	227 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	CNM67	P53865	581 aa	Known RBP	4.21	□□□□□ -1.74
MRPL49	YJL096W	TEP1	P53916	434 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	PTA1	Q01329	785 aa	Predicted RBP	4.21	□□□□□ -1.74
MRPL49	YJL096W	FRE7	Q12333	620 aa		4.21	□□□□□ -1.74
MRPL49	YJL096W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
MRPL49	YJL096W	AAC3	P18238	307 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	OPI1	P21957	404 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	KIN82	P25341	720 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	BLI1	P35727	113 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	EMP65	P40085	556 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	TMA108	P40462	946 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	BIT61	P47041	543 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	MAD3	P47074	515 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	YJR039W	P47107	1121 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	ARC35	P53731	342 aa	Known RBP	4.2	□□□□□ -1.74
MRPL49	YJL096W	DAK1	P54838	584 aa	Known RBP	4.2	□□□□□ -1.74
MRPL49	YJL096W	TRS23	Q03784	219 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	YMR018W	Q04364	514 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	RTP1	Q12751	981 aa		4.2	□□□□□ -1.74
MRPL49	YJL096W	NCP1	P16603	691 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	TUP1	P16649	713 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	HXT4	P32467	576 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	YPT7	P32939	208 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	PSY4	P38193	441 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	YHR202W	P38887	602 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	YEL068C	P39977	110 aa		4.19	□□□□□ -1.74
MRPL49	YJL096W	SCS2	P40075	244 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	DPH1	P40487	425 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	RRT6	P53117	311 aa	Predicted RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	CPR6	P53691	371 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	VIP1	Q06685	1146 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	NGL1	Q08213	363 aa	Known RBP	4.19	□□□□□ -1.74
MRPL49	YJL096W	RPS9B	P05755	195 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	ADH4	P10127	382 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	CDC26	P14724	124 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	GUK1	P15454	187 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	PMA2	P19657	947 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	PHO3	P24031	467 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	PET309	P32522	965 aa	Predicted RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	TOA1	P32773	286 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	APM3	P38153	483 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	AXL2	P38928	823 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	VID28	P40547	921 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	UPF3	P48412	387 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	RNR4	P49723	345 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	PAP2	P53632	584 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	TIM10	P87108	93 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	HLR1	Q04429	423 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	TSR2	Q06672	205 aa	Known RBP	4.18	□□□□□ -1.74
MRPL49	YJL096W	SSM4	P40318	1319 aa		4.18	□□□□□ -1.74
MRPL49	YJL096W	FRS1	P15624	595 aa	Known RBP	4.17	□□□□□ -1.74
MRPL49	YJL096W	HOP1	P20050	605 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	PET127	P32606	800 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	TFC3	P34111	1160 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	RRN3	P36070	627 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	DUN1	P39009	513 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	VTC2	P43585	828 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	GPD1	Q00055	391 aa	Known RBP	4.17	□□□□□ -1.74
MRPL49	YJL096W	GRC3	Q07845	632 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	VHS3	Q08438	674 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	ENT1	Q12518	454 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	APM4	Q99186	491 aa		4.17	□□□□□ -1.74
MRPL49	YJL096W	SNF1	P06782	633 aa	Known RBP	4.16	□□□□□ -1.74
MRPL49	YJL096W	MET8	P15807	274 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	RER1	P25560	188 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	IFA38	P38286	347 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	IMA5	P40884	581 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	ERG13	P54839	491 aa	Known RBP	4.16	□□□□□ -1.74
MRPL49	YJL096W	ARA2	Q04212	335 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	VBA4	Q04602	768 aa	Known RBP	4.16	□□□□□ -1.74
MRPL49	YJL096W	SDH5	Q08230	162 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	TRM8	Q12009	286 aa		4.16	□□□□□ -1.74
MRPL49	YJL096W	RTK1	Q12100	620 aa	Predicted RBP	4.16	□□□□□ -1.74
MRPL49	YJL096W	RPL7A	P05737	244 aa	Known RBP	4.15	□□□□□ -1.75
MRPL49	YJL096W	HEM1	P09950	548 aa	Predicted RBP	4.15	□□□□□ -1.75
MRPL49	YJL096W	SWI4	P25302	1093 aa	Known RBP	4.15	□□□□□ -1.75
MRPL49	YJL096W	IMP2'	P32351	346 aa		4.15	□□□□□ -1.75
MRPL49	YJL096W	SWI3	P32591	825 aa		4.15	□□□□□ -1.75
MRPL49	YJL096W	RKM3	P38222	552 aa		4.15	□□□□□ -1.75
MRPL49	YJL096W	PUG1	P40100	303 aa		4.15	□□□□□ -1.75
MRPL49	YJL096W	SMK1	P41808	388 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms