RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PCF11P39081 626 aaPredicted RBP3.7□□□□□ -1.82
VPS53YJL029C YNR065CP53751 1116 aa3.7□□□□□ -1.82
VPS53YJL029C CTR9P89105 1077 aa3.7□□□□□ -1.82
VPS53YJL029C ATG16Q03818 150 aa3.7□□□□□ -1.82
VPS53YJL029C YMR018WQ04364 514 aa3.7□□□□□ -1.82
VPS53YJL029C YSH1Q06224 779 aaPredicted RBP3.7□□□□□ -1.82
VPS53YJL029C DAS2Q12084 232 aa3.7□□□□□ -1.82
VPS53YJL029C HXT1P32465 570 aa3.7□□□□□ -1.82
VPS53YJL029C SEC6P32844 805 aa3.7□□□□□ -1.82
VPS53YJL029C BLI1P35727 113 aa3.7□□□□□ -1.82
VPS53YJL029C YEL075CP39972 122 aa3.7□□□□□ -1.82
VPS53YJL029C RPT2P40327 437 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C KTR7P40504 517 aa3.7□□□□□ -1.82
VPS53YJL029C SAP185P40856 1058 aa3.7□□□□□ -1.82
VPS53YJL029C STU2P46675 888 aa3.7□□□□□ -1.82
VPS53YJL029C PYK2P52489 506 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C GYL1Q04322 720 aa3.7□□□□□ -1.82
VPS53YJL029C SPG3Q04398 127 aaPredicted RBP3.7□□□□□ -1.82
VPS53YJL029C YIH1P25637 258 aa3.69□□□□□ -1.82
VPS53YJL029C SEC65P29478 273 aa3.69□□□□□ -1.82
VPS53YJL029C MED6P38782 295 aa3.69□□□□□ -1.82
VPS53YJL029C YIR007WP40566 764 aa3.69□□□□□ -1.82
VPS53YJL029C ERG10P41338 398 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C MMM1P41800 426 aa3.69□□□□□ -1.82
VPS53YJL029C BST1P43571 1029 aa3.69□□□□□ -1.82
VPS53YJL029C YJL132WP47014 750 aa3.69□□□□□ -1.82
VPS53YJL029C ROM1P53046 1155 aa3.69□□□□□ -1.82
VPS53YJL029C ALF1P53904 254 aa3.69□□□□□ -1.82
VPS53YJL029C YMR206WQ03695 313 aa3.69□□□□□ -1.82
VPS53YJL029C UTP5Q04177 643 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C FRA1Q07825 749 aa3.69□□□□□ -1.82
VPS53YJL029C STE13P33894 931 aa3.69□□□□□ -1.82
VPS53YJL029C YKL151CP36059 337 aa3.69□□□□□ -1.82
VPS53YJL029C HSL7P38274 827 aa3.69□□□□□ -1.82
VPS53YJL029C FSH1P38777 243 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C YHR219WP38900 624 aa3.69□□□□□ -1.82
VPS53YJL029C BOL3P39724 118 aa3.69□□□□□ -1.82
VPS53YJL029C MNN11P46985 422 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C PRP24P49960 444 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C NMA2P53204 395 aa3.69□□□□□ -1.82
VPS53YJL029C COQ6P53318 479 aa3.69□□□□□ -1.82
VPS53YJL029C YGR283CP53336 341 aaPredicted RBP3.69□□□□□ -1.82
VPS53YJL029C YTP1P53584 459 aa3.69□□□□□ -1.82
VPS53YJL029C INP2Q03824 705 aa3.69□□□□□ -1.82
VPS53YJL029C LCB5Q06147 687 aaKnown RBP3.69□□□□□ -1.82
VPS53YJL029C JIP5Q06214 492 aaPredicted RBP3.69□□□□□ -1.82
VPS53YJL029C GPM3Q12326 303 aa3.69□□□□□ -1.82
VPS53YJL029C STB3Q12427 513 aa3.69□□□□□ -1.82
VPS53YJL029C NHA1Q99271 985 aa3.69□□□□□ -1.82
VPS53YJL029C MIH1P23748 554 aa3.68□□□□□ -1.82
VPS53YJL029C YKL050CP35736 922 aa3.68□□□□□ -1.82
VPS53YJL029C JNM1P36224 373 aa3.68□□□□□ -1.82
VPS53YJL029C KTR4P38131 464 aa3.68□□□□□ -1.82
VPS53YJL029C APM3P38153 483 aa3.68□□□□□ -1.82
VPS53YJL029C YHL041WP38730 149 aa3.68□□□□□ -1.82
VPS53YJL029C PIK1P39104 1066 aa3.68□□□□□ -1.82
VPS53YJL029C YJR061WP40355 935 aa3.68□□□□□ -1.82
VPS53YJL029C TCB2P48231 1178 aa3.68□□□□□ -1.82
VPS53YJL029C TAD1P53065 400 aa3.68□□□□□ -1.82
VPS53YJL029C ERG5P54781 538 aa3.68□□□□□ -1.82
VPS53YJL029C UME1Q03010 460 aa3.68□□□□□ -1.82
VPS53YJL029C YDR444WQ04093 687 aa3.68□□□□□ -1.82
VPS53YJL029C KAP95Q06142 861 aaKnown RBP3.68□□□□□ -1.82
VPS53YJL029C SIL1Q08199 421 aa3.68□□□□□ -1.82
VPS53YJL029C THI21Q08975 551 aa3.68□□□□□ -1.82
VPS53YJL029C RRP6Q12149 733 aaKnown RBP3.68□□□□□ -1.82
VPS53YJL029C PMS1P14242 873 aa3.68□□□□□ -1.82
VPS53YJL029C MSH2P25847 964 aa3.68□□□□□ -1.82
VPS53YJL029C PXA2P34230 853 aa3.68□□□□□ -1.82
VPS53YJL029C FAA3P39002 694 aa3.68□□□□□ -1.82
VPS53YJL029C GDH3P39708 457 aa3.68□□□□□ -1.82
VPS53YJL029C EDC3P39998 551 aaKnown RBP3.68□□□□□ -1.82
VPS53YJL029C YIL054WP40524 105 aa3.68□□□□□ -1.82
VPS53YJL029C ACS2P52910 683 aaKnown RBP3.68□□□□□ -1.82
VPS53YJL029C IPI3P53877 555 aa3.68□□□□□ -1.82
VPS53YJL029C KTR6P54070 446 aa3.68□□□□□ -1.82
VPS53YJL029C VPS9P54787 451 aa3.68□□□□□ -1.82
VPS53YJL029C CDC55Q00362 526 aa3.68□□□□□ -1.82
VPS53YJL029C NGL3Q03210 505 aa3.68□□□□□ -1.82
VPS53YJL029C IVY1Q04934 453 aa3.68□□□□□ -1.82
VPS53YJL029C EAF1Q06337 982 aa3.68□□□□□ -1.82
VPS53YJL029C YOR387CQ08910 206 aa3.68□□□□□ -1.82
VPS53YJL029C EMP46Q12396 444 aa3.68□□□□□ -1.82
VPS53YJL029C HIS1P00498 297 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C MTF2P10849 440 aa3.67□□□□□ -1.82
VPS53YJL029C GIP1P38229 639 aa3.67□□□□□ -1.82
VPS53YJL029C TMN3P40071 706 aa3.67□□□□□ -1.82
VPS53YJL029C YER189WP40104 122 aa3.67□□□□□ -1.82
VPS53YJL029C ARG2P40360 574 aa3.67□□□□□ -1.82
VPS53YJL029C MND2P40577 368 aa3.67□□□□□ -1.82
VPS53YJL029C DLD2P46681 530 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C SNG1P46950 547 aa3.67□□□□□ -1.82
VPS53YJL029C ASG7P46993 209 aa3.67□□□□□ -1.82
VPS53YJL029C AIM23P47015 356 aa3.67□□□□□ -1.82
VPS53YJL029C JJJ1P53863 590 aa3.67□□□□□ -1.82
VPS53YJL029C NDD1Q08887 554 aa3.67□□□□□ -1.82
VPS53YJL029C ATG9Q12142 997 aa3.67□□□□□ -1.82
VPS53YJL029C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
VPS53YJL029C IZH4Q99393 312 aa3.67□□□□□ -1.82
VPS53YJL029C SPO12P17123 173 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms